RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SFTPDP35247 375 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 IFNGR2P38484 337 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC1A3P43003 542 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 MAGEA5P43359 124 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 GPR4P46093 362 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 RPS5P46782 204 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 GSSP48637 474 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 STARP49675 285 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TNFSF10P50591 281 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 POLR2HP52434 150 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 HMGA2P52926 109 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 AQP4P55087 323 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 UCNP55089 124 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TPD52P55327 224 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 DSCR4P56555 118 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OR2B6P58173 313 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SRYQ05066 204 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 CRYZQ08257 329 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 FOXF1Q12946 379 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC10A1Q14973 349 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM176BQ3YBM2 270 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 PLAC9Q5JTB6 97 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OGFRL1Q5TC84 451 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 PGBD2Q6P3X8 592 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SHQ1Q6PI26 577 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 IZUMO2Q6UXV1 221 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 WDR88Q6ZMY6 472 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ASB18Q6ZVZ8 466 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 MBOAT2Q6ZWT7 520 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 HIST3H2AQ7L7L0 130 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 GRINAQ7Z429 371 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ZER1Q7Z7L7 766 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ADGRG3Q86Y34 549 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 EPHX4Q8IUS5 362 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 UBQLNLQ8IYU4 475 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 IZUMO1Q8IYV9 350 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OFCC1Q8IZS5 231 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM251Q8N6I4 163 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 LRRC17Q8N6Y2 441 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 FADS6Q8N9I5 356 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM178AQ8NBL3 297 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 FAM98AQ8NCA5 519 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 MDS2Q8NDY4 140 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 FAM71CQ8NEG0 241 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OR4K5Q8NGD3 323 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OR51A7Q8NH64 312 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC7A13Q8TCU3 470 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 DNAJA4Q8WW22 397 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 CYGBQ8WWM9 190 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OIT3Q8WWZ8 545 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ACOT11Q8WXI4 607 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TM9SF4Q92544 642 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 HIST1H2ACQ93077 130 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC35B4Q969S0 331 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 KTI12Q96EK9 354 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SGTBQ96EQ0 304 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 LRRC46Q96FV0 321 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF597Q96LX8 424 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 HS6ST2Q96MM7 605 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SFXN2Q96NB2 322 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 NIPSNAP1Q9BPW8 284 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 RBM4BQ9BQ04 359 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 PRSS27Q9BQR3 290 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 RBM4Q9BWF3 364 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TTTY12Q9BZ98 90 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 UCK2Q9BZX2 261 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OR11A1Q9GZK7 315 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 POLR2J2Q9GZM3 115 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 POLR2J3Q9H1A7 115 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 VCXQ9H320 206 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 KRCC1Q9NPI7 259 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SERINC1Q9NRX5 453 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 KRT84Q9NSB2 600 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 MAN2C1Q9NTJ4 1040 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ALKBH4Q9NXW9 302 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 B4GALT7Q9UBV7 327 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 OSGIN1Q9UJX0 560 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ACAD8Q9UKU7 415 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 BOKQ9UMX3 212 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 MGAT4BQ9UQ53 548 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TP53TG5Q9Y2B4 290 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 C15orf41Q9Y2V0 281 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 KLF13Q9Y2Y9 288 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC6A5Q9Y345 797 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF337Q9Y3M9 751 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ORC6Q9Y5N6 252 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 NINQ8N4C6 2090 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 URB1O60287 2271 aaKnown RBP3.65□□□□□ -1.82
TMEM39A-204ENST00000468545 MED13Q9UHV7 2174 aa3.65□□□□□ -1.82
TMEM39A-204ENST00000468545 TRAV27A0A087WT01 109 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A087WUJ7 227 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A087WV48 116 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A087WZY1 265 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 IGLV3-32A0A0A0MS00 114 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A1W2PRQ8 180 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OR2M5A3KFT3 312 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 LRRC3CA6NJW4 275 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 ZAR1LA6NP61 321 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 LINC00473A8K010 186 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 A8MVM7 634 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms