RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PTHP01270 115 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 LCKP06239 509 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 SNRNP70P08621 437 aaKnown RBP7.43□□□□□ -1.22
BRCA1-208ENST00000468300 DNASE1L1P49184 302 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 MS4A18Q3C1V0 323 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 UBE2UQ5VVX9 321 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 MEDAGQ5VYS4 303 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 NXNL2Q5VZ03 156 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 DPY19L2P2Q6ZN68 376 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 SLC43A2Q8N370 569 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 TMEM156Q8N614 296 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 EXD3Q8N9H8 876 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 SLC37A3Q8NCC5 494 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 OR52I1Q8NGK6 324 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 SGCZQ96LD1 299 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 NMNAT2Q9BZQ4 307 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 CCDC86Q9H6F5 360 aaKnown RBP7.43□□□□□ -1.22
BRCA1-208ENST00000468300 NANSQ9NR45 359 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 SCN3BQ9NY72 215 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 STMN3Q9NZ72 180 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 CLEC2DQ9UHP7 191 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 IER3IP1Q9Y5U9 82 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 TRAV20A0A0B4J274 112 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 DCDC2BA2VCK2 349 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 ATP6V1G2-DDX39BF2Z307 99 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 ARPC3O15145 178 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 PRODHO43272 600 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 TXNDC12O95881 172 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 SYT6Q5T7P8 510 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-208ENST00000468300 RNLSQ5VYX0 342 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 TIGD3Q6B0B8 471 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 NIPAL3Q6P499 406 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 PAQR6Q6TCH4 344 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 B3GLCTQ6Y288 498 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 GPALPP1Q8IXQ4 340 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 CYP4Z2PQ8N1L4 340 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF485Q8NCK3 441 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 TMEM234Q8WY98 164 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 TSPAN32Q96QS1 320 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 HES7Q9BYE0 225 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 FAM192AQ9GZU8 254 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 FN3KQ9H479 309 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 KCNN3Q9UGI6 736 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 EXOGQ9Y2C4 368 aaKnown RBP7.43□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF814B7Z6K7 855 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 PLPP3O14495 311 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 GFRA3O60609 400 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 FADS2O95864 444 aaKnown RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 WDPCPO95876 746 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 F13BP05160 661 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ADORA3P0DMS8 318 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 KLK2P20151 261 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SLC6A6P31641 620 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 TGFBR2P37173 567 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CDKN2AP42771 156 aaKnown RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ERVK-25P63136 954 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ITGADQ13349 1161 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CRMP1Q14194 572 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 FAM69AQ5T7M9 428 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SLC16A12Q6ZSM3 486 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF671Q8TAW3 534 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 RASD2Q96D21 266 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 YIPF6Q96EC8 236 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 IP6K3Q96PC2 410 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SLC38A2Q96QD8 506 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 DOK1Q99704 481 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 TM9SF2Q99805 663 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 KATNB1Q9BVA0 655 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CCNB1IP1Q9NPC3 277 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SSUH2Q9Y2M2 353 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 FREM3P0C091 2139 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SMIM31A0A1B0GVY4 71 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 OR6C68A6NDL8 312 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 TRABD2BA6NFA1 517 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 LIPT2A6NK58 231 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 BLOC1S5-TXNDC5H3BN57 136 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 HMGN1P05114 100 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 HLA-DOBP13765 273 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 BMP7P18075 431 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 HTR1FP30939 366 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CD79BP40259 229 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 PRPS1P60891 318 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 TBCEQ15813 527 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 MESTQ5EB52 335 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CXXC5Q7LFL8 322 aaKnown RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CYB561A3Q8NBI2 242 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 MDS2Q8NDY4 140 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 OR52L1Q8NGH7 329 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 FAM216AQ8WUB2 273 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 Q96MT0 163 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ERMAPQ96PL5 475 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 OR5M11Q96RB7 305 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 MFRPQ9BY79 579 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 FGF20Q9NP95 211 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 KLHL1Q9NR64 748 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 PLA2G3Q9NZ20 509 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 BAIAP2Q9UQB8 552 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 RPL36Q9Y3U8 105 aaKnown RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 FAM186AA6NE01 2351 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 BOD1L1Q8NFC6 3051 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms