RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TMEM43Q9BTV4 400 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 RAB1BQ9H0U4 201 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 SLC13A4Q9UKG4 626 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 NOX1Q9Y5S8 564 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 LRP5LA4QPB2 252 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 SERPINI2O75830 405 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 LYPD3O95274 346 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 STAMBPO95630 424 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 THY1P04216 161 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 MTPNP58546 118 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 DAG1Q14118 895 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 IQCCQ4KMZ1 466 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 FAM166AQ6J272 317 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF813Q6ZN06 617 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF627Q7L945 461 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 DHDDSQ86SQ9 333 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 RANBP3LQ86VV4 465 aaPredicted RBP21.14■□□□□ 0.97
PTCH1-210ENST00000468211 TSPYL5Q86VY4 417 aaPredicted RBP21.14■□□□□ 0.97
PTCH1-210ENST00000468211 RBM45Q8IUH3 476 aaKnown RBP21.14■□□□□ 0.97
PTCH1-210ENST00000468211 CCDC36Q8IYA8 594 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 BHLHE22Q8NFJ8 381 aaPredicted RBP21.14■□□□□ 0.97
PTCH1-210ENST00000468211 OR4D11Q8NGI4 311 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 OR6T1Q8NGN1 323 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF385DQ9H6B1 395 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 LPAR3Q9UBY5 353 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 ANGPT4Q9Y264 503 aa21.14■□□□□ 0.97
PTCH1-210ENST00000468211 M0QX08 132 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 CD79AP11912 226 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 DAOP14920 347 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 B4GALT1P15291 398 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF14P17017 642 aaPredicted RBP21.13■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF23P17027 643 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 GSG1Q2KHT4 349 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 FAM120AOSQ5T036 256 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 SWT1Q5T5J6 900 aaKnown RBP21.13■□□□□ 0.97
PTCH1-210ENST00000468211 C11orf65Q8NCR3 313 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 DYDC1Q8WWB3 177 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 CKAP2Q8WWK9 683 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 ANKRD27Q96NW4 1050 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 LEF1Q9UJU2 399 aaPredicted RBP21.13■□□□□ 0.97
PTCH1-210ENST00000468211 KCNS2Q9ULS6 477 aa21.13■□□□□ 0.97
PTCH1-210ENST00000468211 C11orf98E9PRG8 122 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 NR4A1P22736 598 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 AHCYP23526 432 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 GIFP27352 417 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 IL2RGP31785 369 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 SRSF2Q01130 221 aaKnown RBP21.12■□□□□ 0.97
PTCH1-210ENST00000468211 CYP51A1Q16850 503 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 PXKQ7Z7A4 578 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 DPP10Q8N608 796 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 IL17RDQ8NFM7 739 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 OR6N1Q8NGY5 312 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 CGREF1Q99674 301 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 ULBP2Q9BZM5 246 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 POFUT2Q9Y2G5 429 aa21.12■□□□□ 0.97
PTCH1-210ENST00000468211 CPSF4LA6NMK7 179 aaKnown RBP21.11■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF726A6NNF4 738 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 LYNX1G3V0Z9 82 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 FMO6PO60774 539 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 ADRA2AP08913 450 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 LYNX1P0DP58 116 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF35P13682 527 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 KRTAP24-1Q3LI83 254 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 ENTPD8Q5MY95 495 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF613Q6PF04 617 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 OR5J2Q8NH18 312 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 FGFBP3Q8TAT2 258 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 NEU4Q8WWR8 484 aaPredicted RBP21.11■□□□□ 0.97
PTCH1-210ENST00000468211 MRPL37Q9BZE1 423 aaKnown RBP21.11■□□□□ 0.97
PTCH1-210ENST00000468211 TPK1Q9H3S4 243 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 EVA1AQ9H8M9 152 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 DYNLRB1Q9NP97 96 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 B3GAT2Q9NPZ5 323 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 NDUFAF1Q9Y375 327 aa21.11■□□□□ 0.97
PTCH1-210ENST00000468211 VSTM5A8MXK1 200 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 CHP2O43745 196 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 LILRA1O75019 489 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 TGFAP01135 160 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 PATE4P0C8F1 98 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 ADORA3P0DMS8 318 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 IFNGR1P15260 489 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 CD247P20963 164 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 BIDP55957 195 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 RBBP4Q09028 425 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 LRRC17Q8N6Y2 441 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF540Q8NDQ6 660 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 VANGL1Q8TAA9 524 aaPredicted RBP21.1■□□□□ 0.97
PTCH1-210ENST00000468211 FOXB1Q99853 325 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 RABEP2Q9H5N1 569 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 INTS9Q9NV88 658 aaKnown RBP21.1■□□□□ 0.97
PTCH1-210ENST00000468211 TAS2R5Q9NYW4 299 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 CMAHPQ9Y471 501 aa21.1■□□□□ 0.97
PTCH1-210ENST00000468211 MT-ATP6P00846 226 aa21.09■□□□□ 0.97
PTCH1-210ENST00000468211 C8BP07358 591 aa21.09■□□□□ 0.97
PTCH1-210ENST00000468211 SRD5A1P18405 259 aa21.09■□□□□ 0.97
PTCH1-210ENST00000468211 GIPRP48546 466 aa21.09■□□□□ 0.97
PTCH1-210ENST00000468211 PTDSS1P48651 473 aaKnown RBP21.09■□□□□ 0.97
PTCH1-210ENST00000468211 CSNK1A1P48729 337 aa21.09■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF74Q16587 644 aa21.09■□□□□ 0.97
PTCH1-210ENST00000468211 ZNF786Q8N393 782 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms