RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PUDPQ08623 228 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 ARMC8Q8IUR7 673 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 SCAIQ8N9R8 606 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 OR6N1Q8NGY5 312 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 OR6S1Q8NH40 331 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 UBASH3BQ8TF42 649 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 LRR1Q96L50 414 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 ULBP2Q9BZM5 246 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 TMEM38AQ9H6F2 299 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 SLC52A3Q9NQ40 469 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 NOX1Q9Y5S8 564 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 NBEAL1Q6ZS30 2694 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 ZNF726A6NNF4 738 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 EVPLLA8MZ36 301 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 LILRA1O75019 489 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 TACSTD2P09758 323 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 IFNGR1P15260 489 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 NR4A1P22736 598 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 AHCYP23526 432 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 CDH12P55289 794 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 TRIP10Q15642 601 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 MSMPQ1L6U9 139 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 AGKQ53H12 422 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 RANBP3LQ86VV4 465 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-207ENST00000467819 ZNF786Q8N393 782 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 HIPK4Q8NE63 616 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 LRRC8CQ8TDW0 803 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 CCDC28BQ9BUN5 200 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 MRPL37Q9BZE1 423 aaKnown RBP18.17■□□□□ 0.5
COL9A3-207ENST00000467819 MRPL39Q9NYK5 338 aaKnown RBP18.17■□□□□ 0.5
COL9A3-207ENST00000467819 CORO2BQ9UQ03 480 aa18.17■□□□□ 0.5
COL9A3-207ENST00000467819 C11orf98E9PRG8 122 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 M0R3H8 397 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 ERLIN1O75477 346 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 SERPINB7O75635 380 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 ZNF14P17017 642 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-207ENST00000467819 PTDSS1P48651 473 aaKnown RBP18.16■□□□□ 0.5
COL9A3-207ENST00000467819 TRMT5Q32P41 509 aaKnown RBP18.16■□□□□ 0.5
COL9A3-207ENST00000467819 SMYD1Q8NB12 490 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 BHLHE22Q8NFJ8 381 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-207ENST00000467819 MRPL24Q96A35 216 aaKnown RBP18.16■□□□□ 0.5
COL9A3-207ENST00000467819 FOXB1Q99853 325 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 CPPED1Q9BRF8 314 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-207ENST00000467819 TMEM43Q9BTV4 400 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 ANGPT4Q9Y264 503 aa18.16■□□□□ 0.5
COL9A3-207ENST00000467819 PLPP3O14495 311 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 GPX2P18283 190 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 RIN1Q13671 783 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 CCNIQ14094 377 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 SQLEQ14534 574 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 NHLRC1Q6VVB1 395 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 SNX32Q86XE0 403 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 LINC01356Q8N9X3 169 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 ZNF75AQ96N20 296 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 MCHR1Q99705 422 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 SYT3Q9BQG1 590 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 ZNF224Q9NZL3 707 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 SPEF1Q9Y4P9 236 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 GMEB1Q9Y692 573 aa18.15■□□□□ 0.5
COL9A3-207ENST00000467819 M0R233 179 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 SYNGR3O43761 229 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 MFN2O95140 757 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 RAB36O95755 333 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 OPN1SWP03999 348 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 ADORA3P0DMS8 318 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 ZNF35P13682 527 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 GIPRP48546 466 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 CSNK1A1P48729 337 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 BIDP55957 195 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 RAB1AP62820 205 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 BEND6Q5SZJ8 279 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-207ENST00000467819 SWT1Q5T5J6 900 aaKnown RBP18.14■□□□□ 0.49
COL9A3-207ENST00000467819 GKAP1Q5VSY0 366 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-207ENST00000467819 ZNF627Q7L945 461 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 PXKQ7Z7A4 578 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 OR5J2Q8NH18 312 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 HPS1Q92902 700 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 REV1Q9UBZ9 1251 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 FZR1Q9UM11 496 aa18.14■□□□□ 0.49
COL9A3-207ENST00000467819 TCN1P20061 433 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-207ENST00000467819 SRP14P37108 136 aaKnown RBP18.13■□□□□ 0.49
COL9A3-207ENST00000467819 ALDH3B1P43353 468 aa18.13■□□□□ 0.49
COL9A3-207ENST00000467819 EVX1P49640 407 aa18.13■□□□□ 0.49
COL9A3-207ENST00000467819 ATP4BP51164 291 aa18.13■□□□□ 0.49
COL9A3-207ENST00000467819 GALK2Q01415 458 aa18.13■□□□□ 0.49
COL9A3-207ENST00000467819 MAD2L1BPQ15013 274 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-207ENST00000467819 AGBL2Q5U5Z8 902 aa18.13■□□□□ 0.49
COL9A3-207ENST00000467819 DLEU7Q6UYE1 221 aa18.13■□□□□ 0.49
COL9A3-207ENST00000467819 EVA1AQ9H8M9 152 aa18.13■□□□□ 0.49
COL9A3-207ENST00000467819 TMEFF2Q9UIK5 374 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-207ENST00000467819 CPSF4LA6NMK7 179 aaKnown RBP18.12■□□□□ 0.49
COL9A3-207ENST00000467819 HAX1O00165 279 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 UBL3O95164 117 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 OR6A2O95222 327 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 MT-ATP6P00846 226 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 PATE4P0C8F1 98 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 GLRXP35754 106 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 CDH15P55291 814 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 RAB39AQ14964 217 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 CYP51A1Q16850 503 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms