RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 POFUT2Q9Y2G5 429 aa8.89□□□□□ -0.99
CD40-204ENST00000466205 ANKRD17O75179 2603 aaKnown RBP8.89□□□□□ -0.99
CD40-204ENST00000466205 OTOGQ6ZRI0 2925 aa8.89□□□□□ -0.99
CD40-204ENST00000466205 PRR14LQ5THK1 2151 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 TRAV27A0A087WT01 109 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 TRIM64A6NGJ6 449 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 TRIM64BA6NI03 449 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 OR6C65A6NJZ3 312 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 ZNF99A8MXY4 864 aaPredicted RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 MCIDASD6RGH6 385 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 NDUFAB1O14561 156 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 SMAD7O15105 426 aaKnown RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 NDUFS7O75251 213 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 HLA-HP01893 362 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 DANCRP0C864 163 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 SAGP10523 405 aaPredicted RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 CD79AP11912 226 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 B4GALT1P15291 398 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 MAKP20794 623 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 RBM34P42696 430 aaKnown RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 GPR4P46093 362 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 FABP6P51161 128 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 IDH3GP51553 393 aaPredicted RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 ATP5J2P56134 94 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 CLRN1P58418 232 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 RUNX1T1Q06455 604 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 GKAP1Q5VSY0 366 aaPredicted RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 ANKRD16Q6P6B7 361 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 NHLRC1Q6VVB1 395 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 ZNF730Q6ZMV8 503 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 ZNF813Q6ZN06 617 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 MDP1Q86V88 176 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 PGAM4Q8N0Y7 254 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 DEPDC4Q8N2C3 294 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 CIARTQ8N365 385 aaPredicted RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 SYT14Q8NB59 555 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 OR51A7Q8NH64 312 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 ZNF566Q969W8 418 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 BPIFA2Q96DR5 249 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 HS6ST2Q96MM7 605 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 SLC38A2Q96QD8 506 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 ZNF347Q96SE7 839 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 PIP5K1AQ99755 562 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 TMUB1Q9BVT8 246 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 POLR2J2Q9GZM3 115 aaKnown RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 POLR2J3Q9H1A7 115 aaKnown RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 GSX1Q9H4S2 264 aaPredicted RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 CXorf56Q9H5V9 222 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 B3GAT2Q9NPZ5 323 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 MAN2C1Q9NTJ4 1040 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 GDF2Q9UK05 429 aaPredicted RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 RPS6KA6Q9UK32 745 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 MGAT4BQ9UQ53 548 aa8.88□□□□□ -0.99
CD40-204ENST00000466205 PRRC2AP48634 2157 aaKnown RBP8.88□□□□□ -0.99
CD40-204ENST00000466205 TACC2O95359 2948 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 A0A1W2PRG6 482 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 RPL36A-HNRNPH2H7BZ11 118 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 GMNNO75496 209 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 PRSS23O95084 383 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 BCL10O95999 233 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 CECR9P0C854 216 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 PATE4P0C8F1 98 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 THRBP10828 461 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 CALCRP30988 508 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 VLDLRP98155 873 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 ZP4Q12836 540 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 TRAM2Q15035 370 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 ALG10Q5BKT4 473 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 FGD3Q5JSP0 725 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 SHEQ5VZ18 495 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 C16orf89Q6UX73 402 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 RINLQ6ZS11 566 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 Q71RC1 249 aaPredicted RBP8.87□□□□□ -0.99
CD40-204ENST00000466205 TSEN54Q7Z6J9 526 aaKnown RBP8.87□□□□□ -0.99
CD40-204ENST00000466205 OFCC1Q8IZS5 231 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 LRRC75A-AS1Q8N1F1 130 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 CLDN22Q8N7P3 220 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 CCDC197Q8NCU1 140 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 OR13C2Q8NGS9 318 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 OR52J3Q8NH60 311 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 OR6X1Q8NH79 312 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 IGFBPL1Q8WX77 278 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 ASB10Q8WXI3 467 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 TMEM54Q969K7 222 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 MS4A3Q96HJ5 214 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 FAM46AQ96IP4 442 aaKnown RBP8.87□□□□□ -0.99
CD40-204ENST00000466205 FOXB1Q99853 325 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 KCNS3Q9BQ31 491 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 TRAF4Q9BUZ4 470 aaPredicted RBP8.87□□□□□ -0.99
CD40-204ENST00000466205 CACNG6Q9BXT2 260 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 NOX3Q9HBY0 568 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 INIPQ9NRY2 104 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 GLTPQ9NZD2 209 aa8.87□□□□□ -0.99
CD40-204ENST00000466205 SAMD4AQ9UPU9 718 aaKnown RBP8.87□□□□□ -0.99
CD40-204ENST00000466205 A0A087WUU8 490 aa8.86□□□□□ -0.99
CD40-204ENST00000466205 ARPC4-TTLL3A0A0A6YYG9 625 aa8.86□□□□□ -0.99
CD40-204ENST00000466205 EFCAB9A8MZ26 197 aa8.86□□□□□ -0.99
CD40-204ENST00000466205 B2RBV5 119 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms