RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 H1FNTQ75WM6 255 aaPredicted RBP8.36□□□□□ -1.07
USP39-212ENST00000465514 MAVSQ7Z434 540 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 CCDC36Q8IYA8 594 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 CDK20Q8IZL9 346 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 TMEM123Q8N131 208 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 ZNF786Q8N393 782 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 PIK3C3Q8NEB9 887 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 IL17RDQ8NFM7 739 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 OR9I1Q8NGQ6 314 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 BBS10Q8TAM1 723 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 ZNF417Q8TAU3 575 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 MGARPQ8TDB4 240 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 UBASH3BQ8TF42 649 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 CKAP2Q8WWK9 683 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 GTF2H4Q92759 462 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 SLC38A4Q969I6 547 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 MAELQ96JY0 434 aaKnown RBP8.36□□□□□ -1.07
USP39-212ENST00000465514 DUX5Q96PT3 197 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 OR52B2Q96RD2 323 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 ZNF587Q96SQ5 575 aaPredicted RBP8.36□□□□□ -1.07
USP39-212ENST00000465514 RSPO3Q9BXY4 272 aaPredicted RBP8.36□□□□□ -1.07
USP39-212ENST00000465514 PAIP1Q9H074 479 aaKnown RBP8.36□□□□□ -1.07
USP39-212ENST00000465514 SLITRK2Q9H156 845 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 C12orf10Q9HB07 376 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 DYNLRB1Q9NP97 96 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 A4GALTQ9NPC4 353 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 IGKV1D-42A0A075B6H8 117 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 TRAV36DV7A0A075B6V5 113 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 LOC102725191A0A1B0GVB3 256 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 A0A1B0GWA3 101 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 TMEM120BA0PK00 339 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 POM121CA8CG34 1229 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 ZNF99A8MXY4 864 aaPredicted RBP8.35□□□□□ -1.07
USP39-212ENST00000465514 C5orf58C9J3I9 102 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 MS4A18H0YCH9 400 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 TRAF3IP2O43734 574 aaPredicted RBP8.35□□□□□ -1.07
USP39-212ENST00000465514 AKAP8O43823 692 aaKnown RBP8.35□□□□□ -1.07
USP39-212ENST00000465514 HPRP00739 348 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 HLA-HP01893 362 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 VSIG8P0DPA2 414 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 BMP2P12643 396 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 HLA-DOBP13765 273 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 ADRA2CP18825 462 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 NR4A1P22736 598 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 HTR2AP28223 471 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 SNTB2Q13425 540 aaKnown RBP8.35□□□□□ -1.07
USP39-212ENST00000465514 MS4A18Q3C1V0 323 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 CARD17Q5XLA6 110 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 SLC2A7Q6PXP3 512 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 C5orf46Q6UWT4 87 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 C1QL2Q7Z5L3 287 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 NET1Q7Z628 596 aaPredicted RBP8.35□□□□□ -1.07
USP39-212ENST00000465514 COMTD1Q86VU5 262 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 UEVLDQ8IX04 471 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 MIER2Q8N344 545 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 TEX29Q8N6K0 151 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 LSMEM1Q8N8F7 131 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 OR51F2Q8NH61 342 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 CLDND2Q8NHS1 167 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 C22orf15Q8WYQ4 148 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 TAF15Q92804 592 aaKnown RBP eCLIP8.35□□□□□ -1.07
USP39-212ENST00000465514 MMP27Q9H306 513 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 TPK1Q9H3S4 243 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 RAD21L1Q9H4I0 556 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 NOX3Q9HBY0 568 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 B3GNT2Q9NY97 397 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 PDP1Q9P0J1 537 aaPredicted RBP8.35□□□□□ -1.07
USP39-212ENST00000465514 KLHL14Q9P2G3 628 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 CMAHPQ9Y471 501 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 COL7A1Q02388 2944 aa8.35□□□□□ -1.07
USP39-212ENST00000465514 DNAJC9-AS1A6NH13 148 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 PIN1P1O15428 100 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 TPST1O60507 370 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 CD79AP11912 226 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 ETS2P15036 469 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 NQO1P15559 274 aaKnown RBP8.34□□□□□ -1.07
USP39-212ENST00000465514 HOXB9P17482 250 aaPredicted RBP8.34□□□□□ -1.07
USP39-212ENST00000465514 GCH1P30793 250 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 PRKAR1BP31321 381 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 AQP5P55064 265 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 PIGFQ07326 219 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 SRSF4Q08170 494 aaKnown RBP8.34□□□□□ -1.07
USP39-212ENST00000465514 FADDQ13158 208 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 MSMPQ1L6U9 139 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 GSG1Q2KHT4 349 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 ALG10BQ5I7T1 473 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 ULK3Q6PHR2 472 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 ZNF813Q6ZN06 617 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 CROCCP2Q86T23 111 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 WDFY1Q8IWB7 410 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 C20orf196Q8IYI0 205 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 ADPRHL1Q8NDY3 354 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 NFKBIDQ8NI38 313 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 DNAJA4Q8WW22 397 aaPredicted RBP8.34□□□□□ -1.07
USP39-212ENST00000465514 SLC47A1Q96FL8 570 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 TXNDC15Q96J42 360 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms