RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CCL4L1Q8NHW4 92 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 LMF1Q96S06 567 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 NKX6-2Q9C056 277 aaPredicted RBP11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 DUSP22Q9NRW4 184 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 RXFP3Q9NSD7 469 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 TBC1D29Q9UFV1 150 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 SLC27A6Q9Y2P4 619 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF175Q9Y473 711 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 GGT3PA6NGU5 568 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 CTAG2O75638 210 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 WDPCPO95876 746 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 CSN2P05814 226 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 PVRP15151 417 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 TLX1P31314 330 aaPredicted RBP11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 AQP2P41181 271 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 CAPZA2P47755 286 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 STARP49675 285 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 AGBL4Q5VU57 503 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 TMEM205Q6UW68 189 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 RNF44Q7L0R7 432 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 MCATQ8IVS2 390 aaKnown RBP11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 OR52R1Q8NGF1 315 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 SLC6A15Q9H2J7 730 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 APMAPQ9HDC9 416 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 SLC22A7Q9Y694 548 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 SPTBN5Q9NRC6 3674 aaKnown RBP11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 LOC100509620A0A075B734 347 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 B3GALT2O43825 422 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 EIF4E2O60573 245 aaKnown RBP11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 ADH1CP00326 375 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 F13BP05160 661 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 SLC35G6P0C7Q6 338 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 MGAT2Q10469 447 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 ALKBH1Q13686 389 aaKnown RBP11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 SERTAD2Q14140 314 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 LRRC69Q6ZNQ3 347 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 GATSQ8NAP1 163 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 OR6N1Q8NGY5 312 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 OR10G6Q8NH81 332 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 SLITRK2Q9H156 845 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 RASL12Q9NYN1 266 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 STEAP1Q9UHE8 339 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 ERVK-19Q9WJR5 959 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 DTX4Q9Y2E6 619 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 SLC6A5Q9Y345 797 aa11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 MRPS23Q9Y3D9 190 aaKnown RBP11.46□□□□□ -0.58
CLCNKA-204ENST00000464764 ZNF98A6NK75 572 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 RFPL4AA6NLU0 287 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 C1QTNF3-AMACRE9PGA6 284 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 RFPL4AL1F8VTS6 287 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 LINC01387J3KSC0 135 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 DOK2O60496 412 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 AQP8O94778 261 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 RPA2P15927 270 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 TSFMP43897 325 aaKnown RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 POU3F4P49335 361 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 MRPS10P82664 201 aaKnown RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 TAF13Q15543 124 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 PRICKLE4Q2TBC4 344 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 PABPC1L2AQ5JQF8 200 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 CBLN2Q8IUK8 224 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 C12orf76Q8N812 135 aaPredicted RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 CCDC74AQ96AQ1 378 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 OR2A5Q96R48 311 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 TINAGL1Q9GZM7 467 aaPredicted RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 KLF15Q9UIH9 416 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 MPDZO75970 2070 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 ITGA5P08648 1049 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 CSRP1P21291 193 aaKnown RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 PPM1AP35813 382 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 UBE2IP63279 158 aaKnown RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 NR0B2Q15466 257 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 GUCA2BQ16661 112 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 BEST3Q8N1M1 668 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 ZNF676Q8N7Q3 588 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 PHYHIPQ92561 330 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 NSMAFQ92636 917 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 PAWRQ96IZ0 340 aaKnown RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 MICU1Q9BPX6 476 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 ZNF471Q9BX82 626 aaPredicted RBP11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 HDAC8Q9BY41 377 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 NMNAT2Q9BZQ4 307 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 WDR76Q9H967 626 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 GMEB2Q9UKD1 530 aa11.45□□□□□ -0.58
CLCNKA-204ENST00000464764 ALOX12BO75342 701 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 OR4E1P0C645 316 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 FAUP35544 74 aaKnown RBP11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 PSG6Q00889 435 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 C2orf76Q3KRA6 126 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 DNM1P46Q6ZS02 220 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 DPY19L4Q7Z388 723 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 GALNT16Q8N428 558 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 C10orf53Q8N6V4 93 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 STEAP2Q8NFT2 490 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 AMELYQ99218 206 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 SLC6A17Q9H1V8 727 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 FGF22Q9HCT0 170 aa11.44□□□□□ -0.58
CLCNKA-204ENST00000464764 PHPT1Q9NRX4 125 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms