RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NRF1Q16656 503 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 PLCXD3Q63HM9 321 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 MICU2Q8IYU8 434 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 FAM9CQ8IZT9 166 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 CLEC4FQ8N1N0 589 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 OR5D13Q8NGL4 314 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 SGK3Q96BR1 496 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 RPUSD4Q96CM3 377 aaKnown RBP3.64□□□□□ -1.83
PTCD3-205ENST00000464541 STARD4Q96DR4 205 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 PRRC1Q96M27 445 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 ZNF396Q96N95 335 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-205ENST00000464541 ROPN1BQ9BZX4 212 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-205ENST00000464541 RGCCQ9H4X1 137 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 ELOVL3Q9HB03 270 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 CYP3A43Q9HB55 503 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 ZNF160Q9HCG1 818 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 ZFP14Q9HCL3 533 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 BZW2Q9Y6E2 419 aaKnown RBP3.64□□□□□ -1.83
PTCD3-205ENST00000464541 NINLQ9Y2I6 1382 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 A0A0J9YYE9 177 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 PSMD11O00231 422 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 BTN3A3O00478 584 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 POLR1CO15160 346 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-205ENST00000464541 FGFR1OPO95684 399 aaKnown RBP3.63□□□□□ -1.83
PTCD3-205ENST00000464541 TRBC1P01850 177 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 TPM3P06753 285 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 CRYGCP07315 174 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 PLEKP08567 350 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-205ENST00000464541 STAG3L2P0CL84 134 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 MCF2P10911 925 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 ADRB3P13945 408 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 TNNI1P19237 187 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 COX5AP20674 150 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 UQCRC2P22695 453 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 LHX2P50458 406 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 SEC61GP60059 68 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 ZNF763Q0D2J5 394 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 CHRNA6Q15825 494 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 XKR7Q5GH72 579 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 AP1ARQ63HQ0 302 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 ACP7Q6ZNF0 438 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 RFLNAQ6ZTI6 216 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 CCDC80Q76M96 950 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 NLRP9Q7RTR0 991 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 VSTM4Q8IW00 320 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 H1FOOQ8IZA3 346 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-205ENST00000464541 RDH10Q8IZV5 341 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 FTMTQ8N4E7 242 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 CSGALNACT2Q8N6G5 542 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 OR4D9Q8NGE8 314 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 OR51G1Q8NGK1 321 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 C17orf50Q8WW18 174 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 TBX15Q96SF7 602 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 BPIFA3Q9BQP9 254 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 CENPKQ9BS16 269 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 SLC17A9Q9BYT1 436 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 OR11A1Q9GZK7 315 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 FOLH1BQ9HBA9 442 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 PIPOXQ9P0Z9 390 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 PACSIN2Q9UNF0 486 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-205ENST00000464541 C15orf41Q9Y2V0 281 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 NPTNQ9Y639 398 aa3.63□□□□□ -1.83
PTCD3-205ENST00000464541 V9GYY5 206 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-205ENST00000464541 AKR7A2O43488 359 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 DFNA5O60443 496 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 TSPAN12O95859 305 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 PCCAP05165 728 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-205ENST00000464541 ALOX5P09917 674 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 RBMY1CP0DJD4 496 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 ICAM2P13598 275 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 PTNP21246 168 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 CALCRP30988 508 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 FDFT1P37268 417 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 RAB9AP51151 201 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 DLX1P56177 255 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 PPIL2Q13356 520 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 COTL1Q14019 142 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 C16orf72Q14CZ0 275 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 ANGPT1Q15389 498 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 HNRNPA1L2Q32P51 320 aaKnown RBP3.62□□□□□ -1.83
PTCD3-205ENST00000464541 SLC25A52Q3SY17 297 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 GGTA1PQ4G0N0 100 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 BEND3Q5T5X7 828 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 C6orf89Q6UWU4 347 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 TMIGD1Q6UXZ0 262 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 SSX9Q7RTT3 188 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 PRSS41Q7RTY9 318 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 LINC01551Q86U37 167 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 ATP6V0D2Q8N8Y2 350 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 CLHC1Q8NHS4 586 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 GLYATL2Q8WU03 294 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 PIBF1Q8WXW3 757 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 CIDECQ96AQ7 238 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-205ENST00000464541 ZBED3Q96IU2 234 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-205ENST00000464541 PANX2Q96RD6 677 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 TSG101Q99816 390 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 P2RY13Q9BPV8 354 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 LZTS2Q9BRK4 669 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 C20orf85Q9H1P6 137 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 GEMIN7Q9H840 131 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms