RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 GTDC1Q4AE62 458 aa14.81□□□□□ -0.04
HMGN1-210ENST00000464078 FAM91A1Q658Y4 838 aa14.81□□□□□ -0.04
HMGN1-210ENST00000464078 C1orf229Q6ZS94 237 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-210ENST00000464078 PEG10Q86TG7 708 aaKnown RBP14.81□□□□□ -0.04
HMGN1-210ENST00000464078 LRP11Q86VZ4 500 aa14.81□□□□□ -0.04
HMGN1-210ENST00000464078 BBS10Q8TAM1 723 aa14.81□□□□□ -0.04
HMGN1-210ENST00000464078 RMND5AQ9H871 391 aa14.81□□□□□ -0.04
HMGN1-210ENST00000464078 G6PC2Q9NQR9 355 aa14.81□□□□□ -0.04
HMGN1-210ENST00000464078 SLC7A8Q9UHI5 535 aa14.81□□□□□ -0.04
HMGN1-210ENST00000464078 A0A087WUJ7 227 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 TRPC5OSA6NMA1 111 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 MS4A18H0YCH9 400 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 HDAC3O15379 428 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 PPIHO43447 177 aaKnown RBP14.8□□□□□ -0.04
HMGN1-210ENST00000464078 SLC22A3O75751 556 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 UBL3O95164 117 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 RAB36O95755 333 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 NQO1P15559 274 aaKnown RBP14.8□□□□□ -0.04
HMGN1-210ENST00000464078 EPHA3P29320 983 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 PRKAR1BP31321 381 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 PTDSS1P48651 473 aaKnown RBP14.8□□□□□ -0.04
HMGN1-210ENST00000464078 MYBPC1Q00872 1141 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 PIGFQ07326 219 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 MS4A18Q3C1V0 323 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 ALG10BQ5I7T1 473 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 GKAP1Q5VSY0 366 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-210ENST00000464078 CARD17Q5XLA6 110 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 MGARPQ8TDB4 240 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 ITCHQ96J02 903 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 FOXB1Q99853 325 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 RSPO3Q9BXY4 272 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-210ENST00000464078 ULBP2Q9BZM5 246 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 WDR55Q9H6Y2 383 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-210ENST00000464078 SDR39U1Q9NRG7 319 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-210ENST00000464078 ZIM2Q9NZV7 527 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 POFUT2Q9Y2G5 429 aa14.8□□□□□ -0.04
HMGN1-210ENST00000464078 NUDT7P0C024 238 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 HLA-DOBP13765 273 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 ANPEPP15144 967 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 LSP1P33241 339 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 RAB1AP62820 205 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 PUDPQ08623 228 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 MPP2Q14168 576 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 RGNQ15493 299 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 KRT71Q3SY84 523 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 FAHD2BQ6P2I3 314 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-210ENST00000464078 ULK3Q6PHR2 472 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 C1QL2Q7Z5L3 287 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 ZNF584Q8IVC4 421 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 FAHD2AQ96GK7 314 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 EPYCQ99645 322 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 EMC6Q9BV81 110 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 RAD21L1Q9H4I0 556 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 MED29Q9NX70 200 aa14.79□□□□□ -0.04
HMGN1-210ENST00000464078 MRPL39Q9NYK5 338 aaKnown RBP14.79□□□□□ -0.04
HMGN1-210ENST00000464078 IGLV3-9A0A075B6K5 115 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 A0A0G2JMP0 313 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 A0A0X1KG70 313 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 A0A1W2PPW3 197 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 RGS16O15492 202 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-210ENST00000464078 RGS9O75916 674 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-210ENST00000464078 AVPP01185 164 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 BGLAPP02818 100 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 SERPINA5P05154 406 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 NAT2P11245 290 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 HOXB9P17482 250 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-210ENST00000464078 AQP5P55064 265 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 PCGF3Q3KNV8 242 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 DHRS4L2Q6PKH6 230 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 THSD4Q6ZMP0 1018 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 PXKQ7Z7A4 578 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 COMTD1Q86VU5 262 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 WDFY1Q8IWB7 410 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 MREGQ8N565 214 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 OR4M2Q8NGB6 313 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 OR6N1Q8NGY5 312 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 MAL2Q969L2 176 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 SLC47A1Q96FL8 570 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 TXNDC15Q96J42 360 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 MAELQ96JY0 434 aaKnown RBP14.78□□□□□ -0.04
HMGN1-210ENST00000464078 SUCNR1Q9BXA5 334 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 ASPNQ9BXN1 380 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 SLC52A3Q9NQ40 469 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 NKIRAS2Q9NYR9 191 aa14.78□□□□□ -0.04
HMGN1-210ENST00000464078 TESQ9UGI8 421 aaKnown RBP14.78□□□□□ -0.04
HMGN1-210ENST00000464078 LOC105371242A0A075B767 164 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 A0A0B4J2E0 115 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 A0A1B0GX12 115 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 J3QLI3 93 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 SNNO75324 88 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-210ENST00000464078 ENTPD5O75356 428 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 DEAF1O75398 565 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-210ENST00000464078 NKPD1Q17RQ9 610 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 PRR31Q5SQ13 230 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 C6orf10Q5SRN2 563 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 SWT1Q5T5J6 900 aaKnown RBP14.77□□□□□ -0.05
HMGN1-210ENST00000464078 ACSM5Q6NUN0 579 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 PIWIL3Q7Z3Z3 882 aaKnown RBP14.77□□□□□ -0.05
HMGN1-210ENST00000464078 GTF2H4Q92759 462 aa14.77□□□□□ -0.05
HMGN1-210ENST00000464078 RAB39BQ96DA2 213 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms