RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ZNF813Q6ZN06 617 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 RETREG3Q86VR2 466 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 C10orf53Q8N6V4 93 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 ANKS4BQ8N8V4 417 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 OR6N1Q8NGY5 312 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 OR5J2Q8NH18 312 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 NEU4Q8WWR8 484 aaPredicted RBP12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 TXNDC15Q96J42 360 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 EMC6Q9BV81 110 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 MED29Q9NX70 200 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 POFUT2Q9Y2G5 429 aa12.43□□□□□ -0.42
SNRNP40-203ENST00000463988 TMEM129A0AVI4 362 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 RNF212BA8MTL3 300 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 LRRN3E7EW58 273 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 M0R3H8 397 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 LMX1BO60663 402 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 HLA-HP01893 362 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF16P17020 682 aaPredicted RBP12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 AHCYP23526 432 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 GIFP27352 417 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 CAPZA2P47755 286 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 EVX1P49640 407 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 MTPNP58546 118 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 ZP4Q12836 540 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 DAG1Q14118 895 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 GGTLC2Q14390 218 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 NPTX1Q15818 432 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 GSG1Q2KHT4 349 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 INTS11Q5TA45 600 aaKnown RBP12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 FAM166AQ6J272 317 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 SPATA21Q7Z572 469 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 GPR32P1Q8NGA4 272 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 OR6T1Q8NGN1 323 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 TMEM158Q8WZ71 300 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 MPP4Q96JB8 637 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF75AQ96N20 296 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 ULBP2Q9BZM5 246 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 SLC19A3Q9BZV2 496 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 SHARPINQ9H0F6 387 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 PCDHAC1Q9H158 963 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 VIPAS39Q9H9C1 493 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 NOX3Q9HBY0 568 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 FBXL3Q9UKT7 428 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 SPEF1Q9Y4P9 236 aa12.42□□□□□ -0.42
SNRNP40-203ENST00000463988 IGHV4-61A0A0C4DH41 118 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 TRAPPC13A5PLN9 417 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 EDF1O60869 148 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ENTPD5O75356 428 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 SEC14L2O76054 403 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 OR6A2O95222 327 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 LYPD3O95274 346 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 STAMBPO95630 424 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 VIMP08670 466 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ADORA3P0DMS8 318 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF35P13682 527 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 APEHP13798 732 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF14P17017 642 aaPredicted RBP12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF23P17027 643 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 PCGF2P35227 344 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 CSNK1A1P48729 337 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 SNTB2Q13425 540 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 CAMK2DQ13557 499 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 NFYCQ13952 458 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 SELPLGQ14242 412 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 CARTPTQ16568 116 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF74Q16587 644 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ENTPD8Q5MY95 495 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 HDXQ7Z353 690 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 PIWIL3Q7Z3Z3 882 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 SVOPLQ8N434 492 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 OR6X1Q8NH79 312 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ADAMTS16Q8TE57 1224 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 RASSF5Q8WWW0 418 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 MSI2Q96DH6 328 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 FOXB1Q99853 325 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF426Q9BUY5 554 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 KCNS2Q9ULS6 477 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 CMAHPQ9Y471 501 aa12.41□□□□□ -0.42
SNRNP40-203ENST00000463988 CUBNO60494 3623 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 LOC100289279A0A1B0GTE1 492 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 CPSF4LA6NMK7 179 aaKnown RBP12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 UBL3O95164 117 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 OPN1SWP03999 348 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 THY1P04216 161 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 CD79AP11912 226 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 DAOP14920 347 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 IFNGR1P15260 489 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 CD247P20963 164 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 GZMMP51124 257 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 BIDP55957 195 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 VMACQ2NL98 169 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 IQCCQ4KMZ1 466 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 KRT80Q6KB66 452 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 TTC33Q6PID6 262 aaPredicted RBP12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 SLC35D2Q76EJ3 337 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 CCDC80Q76M96 950 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 WDFY1Q8IWB7 410 aa12.4□□□□□ -0.42
SNRNP40-203ENST00000463988 ZNF786Q8N393 782 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms