RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 DAZLQ92904 295 aaKnown RBP3.22□□□□□ -1.89
SCFD1-204ENST00000463622 LYZL4Q96KX0 146 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 COL21A1Q96P44 957 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 PIP5K1AQ99755 562 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 ECSITQ9BQ95 431 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 PELOQ9BRX2 385 aaKnown RBP3.22□□□□□ -1.89
SCFD1-204ENST00000463622 TTYH2Q9BSA4 534 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 PIMREGQ9BSJ6 248 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM38AQ9H6F2 299 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 C3orf14Q9HBI5 128 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 SH2D2AQ9NP31 389 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 CTPS2Q9NRF8 586 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 DEPPQ9NTK1 212 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 DECR2Q9NUI1 292 aa3.22□□□□□ -1.89
SCFD1-204ENST00000463622 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.22□□□□□ -1.895e-6■■■■□ 22.2
SCFD1-204ENST00000463622 C19orf25Q9UFG5 118 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-204ENST00000463622 FAF1Q9UNN5 650 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-204ENST00000463622 C15orf38-AP3S2A0A0A6YYH1 394 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 A0A1B0GVC2 190 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 TCRBV3S1A0A5B6 114 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FAM90A8PA6NJQ4 464 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 CLCA1A8K7I4 914 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 RNF212BA8MTL3 300 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 EVPLLA8MZ36 301 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ARHGEF9O43307 516 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SCO2O43819 266 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FADS1O60427 444 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 BCAS2O75934 225 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 LYPD3O95274 346 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 UTS2O95399 124 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OXSR1O95747 527 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 NPPAP01160 153 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FAM90A13PP0C7W8 464 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FAM90A24PP0C7X0 464 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 GKN3PP0CG01 181 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 NR2F1P10589 423 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 DRD5P21918 477 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 HTR2AP28223 471 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 KDELR2P33947 212 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 RFC3P40938 356 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 YAP1P46937 504 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR1E2P47887 323 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF136P52737 540 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 GAS1P54826 345 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 EEF1A1P68104 462 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 KCNJ10P78508 379 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ELF3P78545 371 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 VLDLRP98155 873 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 LRRC74AQ0VAA2 488 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 PLCXD2Q0VAA5 305 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FADDQ13158 208 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 TOMM34Q15785 309 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 EXT1Q16394 746 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF791Q3KP31 576 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ANXA2RQ3ZCQ2 193 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 CYBRD1Q53TN4 286 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR5M10Q6IEU7 315 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 IL20RBQ6UXL0 311 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 CCDC80Q76M96 950 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ARPINQ7Z6K5 226 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MARCH3Q86UD3 253 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 RPS19BP1Q86WX3 136 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 LRRC75A-AS1Q8N1F1 130 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 TRIML2Q8N7C3 387 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 C11orf65Q8NCR3 313 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 VANGL1Q8TAA9 524 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 NUBPLQ8TB37 319 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 CANT1Q8WVQ1 401 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 PYDC1Q8WXC3 89 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MOAP1Q96BY2 351 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 NTNG2Q96CW9 530 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ASB9Q96DX5 294 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF845Q96IR2 970 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 STACQ99469 402 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 DEFB126Q9BYW3 111 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 BCL2L10Q9HD36 194 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 PAPOLBQ9NRJ5 636 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ACTR3BQ9P1U1 418 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 P2RX2Q9UBL9 471 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ABCG2Q9UNQ0 655 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF443Q9Y2A4 671 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 RRP15Q9Y3B9 282 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 WDR45Q9Y484 360 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FAM215AQ9Y5M1 114 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 CHCHD2Q9Y6H1 151 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 EXPH5Q8NEV8 1989 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 CPAMD8Q8IZJ3 1885 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 AGAP5A6NIR3 686 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR6C76A6NM76 312 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 KLRC4-KLRK1H3BQV0 150 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 hCG_2039718K7EN88 272 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FFAR1O14842 300 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 HNRNPCL1O60812 293 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 REM1O75628 298 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SLC25A12O75746 678 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ATP5HO75947 161 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZFAND5O76080 213 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 GOSR1O95249 250 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 RFPL3SP0C7P2 107 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 PABPC4LP0CB38 370 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms