RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNF71Q9NQZ8 489 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 UBQLN4Q9NRR5 601 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CYSLTR2Q9NS75 346 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 RBFOX1Q9NWB1 397 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ST6GALNAC2Q9UJ37 374 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 MRTO4Q9UKD2 239 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CNTRLQ7Z7A1 2325 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 IGKV3D-11A0A0A0MRZ8 115 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 MEIOCA2RUB1 952 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 B4DXG7 233 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 K7EM74 188 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 GPRIN2O60269 458 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ALOX12BO75342 701 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 GATBO75879 557 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HPP00738 406 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HIST1H1CP16403 213 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 MAOAP21397 527 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 APEX1P27695 318 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HLA-DMAP28067 261 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 THBS2P35442 1172 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 MAP2K3P46734 347 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 EFNA3P52797 238 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 SLC37A1P57057 533 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 DCAF7P61962 342 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 BCL2A1Q16548 175 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 TRIQKQ629K1 86 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ARL9Q6T311 187 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 B3GLCTQ6Y288 498 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 NDUFAF7Q7L592 441 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 C19orf18Q8NEA5 215 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 OR52E2Q8NGJ4 325 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 OR4C3Q8NH37 302 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 METTL21AQ8WXB1 218 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CMTM3Q96MX0 182 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 SNX18Q96RF0 628 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF552Q9H707 407 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 RNF121Q9H920 327 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 RABL2AQ9UBK7 228 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF221Q9UK13 617 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 FBXL4Q9UKA2 621 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 RABL2BQ9UNT1 228 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 TP53TG5Q9Y2B4 290 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HIF3AQ9Y2N7 669 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 PCSK5Q92824 1860 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 EXPH5Q8NEV8 1989 aa8.96□□□□□ -0.97
PTPRD-207ENST00000463477 IGHV1-45A0A0A0MS14 117 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 A0A0G2JK05 382 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 FRG2CA6NGY1 282 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 A6NL46 340 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 MCIDASD6RGH6 385 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 E9PI62 339 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 TXNDC12O95881 172 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 TFP02787 698 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 KRT8P05787 483 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 FAM157BP0CG42 384 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 CLUP10909 449 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 UBL4AP11441 157 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 COX6A1P12074 109 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 ICAM2P13598 275 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 NPR2P20594 1047 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 KIR2DL3P43628 341 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 GBX2P52951 348 aaPredicted RBP8.96□□□□□ -0.98
PTPRD-207ENST00000463477 SLC25A1P53007 311 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 SLC16A1P53985 500 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 OR12D2P58182 307 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 SKP2Q13309 424 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 IL18Q14116 193 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 INSL4Q14641 139 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 CDK5R1Q15078 307 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 PON3Q15166 354 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 TAB1Q15750 504 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 RSBN1Q5VWQ0 802 aaPredicted RBP8.96□□□□□ -0.98
PTPRD-207ENST00000463477 RPL22L1Q6P5R6 122 aaKnown RBP8.96□□□□□ -0.98
PTPRD-207ENST00000463477 ASB18Q6ZVZ8 466 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 ATG4DQ86TL0 474 aaPredicted RBP8.96□□□□□ -0.98
PTPRD-207ENST00000463477 NR2C2APQ86WQ0 139 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 CYB561A3Q8NBI2 242 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 FAM98AQ8NCA5 519 aaKnown RBP8.96□□□□□ -0.98
PTPRD-207ENST00000463477 NPEPL1Q8NDH3 523 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 ENKURQ8TC29 256 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 PTPMT1Q8WUK0 201 aaPredicted RBP8.96□□□□□ -0.98
PTPRD-207ENST00000463477 C8orf44Q96CB5 159 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 SMIM19Q96E16 107 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 FRMD6Q96NE9 622 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 TBX5Q99593 518 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 MESP1Q9BRJ9 268 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 NUDT9Q9BW91 350 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF700Q9H0M5 742 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 IER3IP1Q9Y5U9 82 aa8.96□□□□□ -0.98
PTPRD-207ENST00000463477 IGKV1D-42A0A075B6H8 117 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 NSG1A0A0A6YYJ2 146 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 OR2W5A6NFC9 320 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 C17orf105B2RV13 164 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 J3QLW9 94 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 MASP2O00187 686 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 RGS13O14921 159 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 CDC123O75794 336 aaPredicted RBP8.95□□□□□ -0.98
PTPRD-207ENST00000463477 ARL6IP5O75915 188 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 NCR1O76036 304 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 GLCEO94923 617 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms