RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 BEX2Q9BXY8 128 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 EFCAB1Q9HAE3 211 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM27Q9HBJ8 222 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 TAS2R16Q9NYV7 291 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 LPAR3Q9UBY5 353 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC13A4Q9UKG4 626 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 MGAT4BQ9UQ53 548 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC9A8Q9Y2E8 581 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 AP3M1Q9Y2T2 418 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 ARL2BPQ9Y2Y0 163 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 TGP01266 2768 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 TRAPPC13A5PLN9 417 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 M0R1B8 84 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 CXCR6O00574 342 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF432O94892 652 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 VAMP5O95183 116 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM107AO95990 144 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 CSF3P09919 207 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 CBLP22681 906 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR1E2P47887 323 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SELENOPP49908 381 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 FABP6P51161 128 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 EFNA4P52798 201 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 UGT2B15P54855 530 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 RAB35Q15286 201 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 FXNQ16595 210 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SWI5Q1ZZU3 235 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 MST1LQ2TV78 715 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 TSPO2Q5TGU0 170 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 CYB5R2Q6BCY4 276 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 KLHL17Q6TDP4 642 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 CREB3L2Q70SY1 520 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC46A3Q7Z3Q1 461 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 TSEN54Q7Z6J9 526 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 GPAT4Q86UL3 456 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 NKAIN4Q8IVV8 208 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 ANKS4BQ8N8V4 417 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 RBM15BQ8NDT2 890 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC26A7Q8TE54 656 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC25A36Q96CQ1 311 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SORCS2Q96PQ0 1159 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 TAPBPLQ9BX59 468 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SHARPINQ9H0F6 387 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 MEPEQ9NQ76 525 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC7A10Q9NS82 523 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 ASB6Q9NWX5 421 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 POU2F3Q9UKI9 436 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 BAG5Q9UL15 447 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC7A7Q9UM01 511 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 A4GNTQ9UNA3 340 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 RASD1Q9Y272 281 aa6.9□□□□□ -1.3
CDC42BPA-210ENST00000462553 CIB4A0PJX0 185 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 ATP6V1G2-DDX39BF2Z307 99 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 MS4A18H0YCH9 400 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 J3KTA2 159 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 J3QL48 77 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR2T1O43869 369 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 LMX1BO60663 402 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 MRPL33O75394 65 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 PRSS23O95084 383 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR5F1O95221 314 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 HLA-DOBP13765 273 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 NCK1P16333 377 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SRD5A1P18405 259 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SELENOWP63302 87 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 PIN1Q13526 163 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZNF74Q16587 644 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 MS4A18Q3C1V0 323 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 FAM120AOSQ5T036 256 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 C9orf135Q5VTT2 229 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR7E24Q6IFN5 339 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 DEF8Q6ZN54 512 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 CBLL1Q75N03 491 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 TMEM123Q8N131 208 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 UBE2J2Q8N2K1 259 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 C17orf78Q8N4C9 275 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 FITM2Q8N6M3 262 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SCAIQ8N9R8 606 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 C1orf162Q8NEQ5 155 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 PFN4Q8NHR9 129 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 MSI2Q96DH6 328 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 OXGR1Q96P68 337 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 EPYCQ99645 322 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 KCTD14Q9BQ13 255 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SOX7Q9BT81 388 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 C1QTNF6Q9BXI9 259 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 POLR2J2Q9GZM3 115 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 POLR2J3Q9H1A7 115 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 NELFAQ9H3P2 528 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 CHODLQ9H9P2 273 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SPAG4Q9NPE6 437 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SLC17A5Q9NRA2 495 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 MAN2C1Q9NTJ4 1040 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 MRPL39Q9NYK5 338 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SELENONQ9NZV5 590 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 CD300AQ9UGN4 299 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 TAGLN3Q9UI15 199 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SH3GLB1Q9Y371 365 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms