RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 DTX3Q8N9I9 347 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF680Q8NEM1 530 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 OR8H1Q8NGG4 311 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 OR13C5Q8NGS8 318 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 STT3BQ8TCJ2 826 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF721Q8TF20 911 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 CLIP3Q96DZ5 547 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
COL4A6-204ENST00000461897 LCORQ96JN0 433 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-204ENST00000461897 LMF1Q96S06 567 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 OR8D2Q9GZM6 311 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 TGIF2Q9GZN2 237 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 NANSQ9NR45 359 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
COL4A6-204ENST00000461897 PRODH2Q9UF12 536 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 TEKT2Q9UIF3 430 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 PCDHGA5Q9Y5G8 931 aa11.32□□□□□ -0.6
COL4A6-204ENST00000461897 A0A1W2PQ72 361 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 A0A1W2PRG6 482 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 NAP1L6A6NFF2 107 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF593O00488 134 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-204ENST00000461897 PRAF2O60831 178 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 TPPPO94811 219 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 NDUFB2O95178 105 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 ZFP36L1Q07352 338 aaKnown RBP11.31□□□□□ -0.6
COL4A6-204ENST00000461897 LGALS3BPQ08380 585 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 IL10RAQ13651 578 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 ST3GAL2Q16842 350 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 NKAIN1Q4KMZ8 207 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 TP53I3Q53FA7 332 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 FCRLBQ6BAA4 426 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 LANCL3Q6ZV70 420 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 PPP1R3BQ86XI6 285 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 ELMOD2Q8IZ81 293 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-204ENST00000461897 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 BCORP1Q8N888 145 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF527Q8NB42 609 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 CITED4Q96RK1 184 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 NMNAT2Q9BZQ4 307 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 AKAP7Q9P0M2 348 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-204ENST00000461897 SCP2D1Q9UJQ7 156 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF222Q9UK12 451 aa11.31□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF879B4DU55 563 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 ARPC3O15145 178 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 SULT1B1O43704 296 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 ADAM11O75078 769 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 LDOC1O95751 146 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-204ENST00000461897 TGM6O95932 706 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 MNDAP41218 407 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 SNTB2Q13425 540 aaKnown RBP11.3□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF141Q15928 474 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 SLC35F2Q8IXU6 374 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 PLPP5Q8NEB5 264 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 FAM71CQ8NEG0 241 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 GIMAP1Q8WWP7 306 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 ARSGQ96EG1 525 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 SLC46A1Q96NT5 459 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 ERMAPQ96PL5 475 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-204ENST00000461897 G6PC3Q9BUM1 346 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 NUDT9Q9BW91 350 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 BRD7Q9NPI1 651 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 NCDNQ9UBB6 729 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 OR10H1Q9Y4A9 318 aa11.3□□□□□ -0.6
COL4A6-204ENST00000461897 TEX51A0A1B0GUA7 166 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 EFCAB7A8K855 629 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 PDCD5O14737 125 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ICMTO60725 284 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 PEX14O75381 377 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ECDO95905 644 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GYPBP06028 91 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GP1BAP07359 652 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 FGF5P12034 268 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 HIST1H1CP16403 213 aaKnown RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ACP1P24666 158 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GDNFP39905 211 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 CCR9P51686 369 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ALG10BQ5I7T1 473 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GPR139Q6DWJ6 353 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 FAM199XQ6PEV8 388 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ULK3Q6PHR2 472 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 DPY19L2P2Q6ZN68 376 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF550Q7Z398 422 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF614Q8N883 585 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 OR52E2Q8NGJ4 325 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 LGALS14Q8TCE9 139 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GRHL3Q8TE85 626 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ZMYND19Q96E35 227 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 DHRS9Q9BPW9 319 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 MESP1Q9BRJ9 268 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 NXF5Q9H1B4 397 aaKnown RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ANKRD10Q9NXR5 420 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 FBXL3Q9UKT7 428 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 RALGAPA1Q6GYQ0 2036 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms