RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR4A8P0C604 315 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 NQO1P15559 274 aaKnown RBP7.94□□□□□ -1.14
BRCA1-207ENST00000461798 CBLP22681 906 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 CALCRP30988 508 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 CRYBA2P53672 197 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 SNRPD2P62316 118 aaKnown RBP7.94□□□□□ -1.14
BRCA1-207ENST00000461798 TUBA1BP68363 451 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 TUBA4AP68366 448 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 POU3F1Q03052 451 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-207ENST00000461798 NFYCQ13952 458 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 CYLC2Q14093 348 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF74Q16587 644 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 VMACQ2NL98 169 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 TMEM249Q2WGJ8 235 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 ENTPD8Q5MY95 495 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 NANOGP8Q6NSW7 305 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 TUBA1AQ71U36 451 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 SNX32Q86XE0 403 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 CALHM3Q86XJ0 350 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 RBM45Q8IUH3 476 aaKnown RBP7.94□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF525Q8N782 197 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 OR4D11Q8NGI4 311 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 OR5J2Q8NH18 312 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 OR10A6Q8NH74 314 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 RASSF5Q8WWW0 418 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 HTRA1Q92743 480 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 TAMM41Q96BW9 452 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 THOC1Q96FV9 657 aaKnown RBP7.94□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF75AQ96N20 296 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 DOK1Q99704 481 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 MDFIQ99750 246 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 SH3GL1Q99961 368 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 EMC6Q9BV81 110 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 SLC19A3Q9BZV2 496 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 NANOGQ9H9S0 305 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 SEC61A2Q9H9S3 476 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 MYOZ1Q9NP98 299 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-207ENST00000461798 B3GAT2Q9NPZ5 323 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 YAE1D1Q9NRH1 226 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 TMEM160Q9NX00 188 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 TAS2R5Q9NYW4 299 aa7.94□□□□□ -1.14
BRCA1-207ENST00000461798 IGHV2OR16-5A0A0B4J2B6 119 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 TMEM129A0AVI4 362 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 TRAPPC13A5PLN9 417 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 A8MV72 311 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-207ENST00000461798 M0R3G1 203 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 IGF2P01344 180 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 OPN1SWP03999 348 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 CELA3BP08861 270 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 NPR2P20594 1047 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 USF1P22415 310 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-207ENST00000461798 THBS4P35443 961 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 EVX1P49640 407 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 PPOXP50336 477 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 PDLIM4P50479 330 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 TRMT5Q32P41 509 aaKnown RBP7.93□□□□□ -1.14
BRCA1-207ENST00000461798 TTC33Q6PID6 262 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-207ENST00000461798 BRICD5Q6PL45 260 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 WDR88Q6ZMY6 472 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 MDP1Q86V88 176 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 MYPOPQ86VE0 399 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-207ENST00000461798 TSPYL5Q86VY4 417 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-207ENST00000461798 WDFY1Q8IWB7 410 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 C10orf53Q8N6V4 93 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 OR8J3Q8NGG0 315 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 OR6X1Q8NH79 312 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 RNF217Q8TC41 542 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 ADAMTS16Q8TE57 1224 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 TMEM54Q969K7 222 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 LRRC58Q96CX6 371 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 SORCS2Q96PQ0 1159 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 PRSS27Q9BQR3 290 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 TMEM120AQ9BXJ8 343 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 MED29Q9NX70 200 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF229Q9UJW7 825 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 POFUT2Q9Y2G5 429 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 FKBP7Q9Y680 259 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 ARFGEF3Q5TH69 2177 aa7.93□□□□□ -1.14
BRCA1-207ENST00000461798 COL6A5A8TX70 2615 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 CR1P17927 2039 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 LOC390937A0A1W2PQ73 354 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 CPSF4LA6NMK7 179 aaKnown RBP7.92□□□□□ -1.14
BRCA1-207ENST00000461798 FXYD1O00168 92 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 LY6HO94772 140 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 CH25HO95992 272 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 HLA-HP01893 362 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ASAH2BP0C7U1 165 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ADORA3P0DMS8 318 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF35P13682 527 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 IFNGR1P15260 489 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF14P17017 642 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-207ENST00000461798 NR4A1P22736 598 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 AHCYP23526 432 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 NR4A2P43354 598 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 CSNK1A1P48729 337 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 IDH3GP51553 393 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-207ENST00000461798 IL1RL1Q01638 556 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 KLF10Q13118 480 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 CAMK2DQ13557 499 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 GSG1Q2KHT4 349 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms