RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RPS6KA6Q9UK32 745 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 MCIDASD6RGH6 385 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 BLOC1S5-TXNDC5H3BN57 136 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 OVOL3O00110 214 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 PIP5K1CO60331 668 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 SEC14L2O76054 403 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 OR7A10O76100 309 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 IFNGR1P15260 489 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 TCN1P20061 433 aaPredicted RBP13.45□□□□□ -0.26
VARS-219ENST00000461328 CDKN1AP38936 164 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 CSNK1A1P48729 337 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 TUBA1BP68363 451 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 TUBA4AP68366 448 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 ARF1P84077 181 aaKnown RBP13.45□□□□□ -0.26
VARS-219ENST00000461328 C1QTNF12Q5T7M4 302 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 GKAP1Q5VSY0 366 aaPredicted RBP13.45□□□□□ -0.26
VARS-219ENST00000461328 CLEC9AQ6UXN8 241 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 Q71RC1 249 aaPredicted RBP13.45□□□□□ -0.26
VARS-219ENST00000461328 TUBA1AQ71U36 451 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 SLC35D2Q76EJ3 337 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 SLC46A3Q7Z3Q1 461 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 CYP4Z1Q86W10 505 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 C20orf196Q8IYI0 205 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 OFCC1Q8IZS5 231 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 BCL2L2Q92843 193 aaPredicted RBP13.45□□□□□ -0.26
VARS-219ENST00000461328 CCT8L2Q96SF2 557 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 RHCGQ9UBD6 479 aa13.45□□□□□ -0.26
VARS-219ENST00000461328 A0A1W2PRG6 482 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 RPL36A-HNRNPH2H7BZ11 118 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 ASAH2BP0C7U1 165 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 FUT1P19526 365 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 MELKQ14680 651 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 TRAM2Q15035 370 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 SAMD4BQ5PRF9 694 aaKnown RBP13.44□□□□□ -0.26
VARS-219ENST00000461328 AGAP6Q5VW22 663 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 GLYATQ6IB77 296 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 C16orf89Q6UX73 402 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 PGAM4Q8N0Y7 254 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 FAM156AQ8NDB6 213 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 ADAD1Q96M93 576 aaKnown RBP13.44□□□□□ -0.26
VARS-219ENST00000461328 TRAF4Q9BUZ4 470 aaPredicted RBP13.44□□□□□ -0.26
VARS-219ENST00000461328 C20orf141Q9NUB4 165 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 NDE1Q9NXR1 346 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 TAS2R5Q9NYW4 299 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 A4GNTQ9UNA3 340 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 POFUT2Q9Y2G5 429 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 SNX13Q9Y5W8 968 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 ATP23Q9Y6H3 246 aa13.44□□□□□ -0.26
VARS-219ENST00000461328 USF3Q68DE3 2245 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 ZNF99A8MXY4 864 aaPredicted RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 E7EQL1 145 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 J3KTA2 159 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 SAGP10523 405 aaPredicted RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 IFI30P13284 250 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 RPL18Q07020 188 aaKnown RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 ZP4Q12836 540 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 ETFDHQ16134 617 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 PHYHD1Q5SRE7 291 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 ZNF730Q6ZMV8 503 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 DTX2Q86UW9 622 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 CCDC197Q8NCU1 140 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 RBM15BQ8NDT2 890 aaKnown RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 MAGEE2Q8TD90 523 aaPredicted RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 ZNF566Q969W8 418 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 LRR1Q96L50 414 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 DHRS9Q9BPW9 319 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 MOV10Q9HCE1 1003 aaKnown RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 MAGEL2Q9UJ55 1249 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 SAMD4AQ9UPU9 718 aaKnown RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 FAM32AQ9Y421 112 aaKnown RBP13.43□□□□□ -0.26
VARS-219ENST00000461328 V9GYQ6 96 aa13.43□□□□□ -0.26
VARS-219ENST00000461328 CADP27708 2225 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 ARPC4-TTLL3A0A0A6YYG9 625 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 ATP6V1G2-DDX39BF2Z307 99 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 LY6G6DO95868 133 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 FAM107AO95990 144 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 BCL10O95999 233 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 IGF2P01344 180 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 F13BP05160 661 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 HEXAP06865 529 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 PAX7P23759 505 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 AQP2P41181 271 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 FABP6P51161 128 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 MNAT1P51948 309 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 CLRN1P58418 232 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 NPRL3Q12980 569 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 CLEC12BQ2HXU8 276 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 B3GLCTQ6Y288 498 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 ZNF813Q6ZN06 617 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 HDDC2Q7Z4H3 204 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 DEFB107AQ8IZN7 70 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 FBXL14Q8N1E6 418 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 ANKS4BQ8N8V4 417 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 OR6X1Q8NH79 312 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 BPIFA2Q96DR5 249 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 ZNF837Q96EG3 531 aaPredicted RBP13.42□□□□□ -0.26
VARS-219ENST00000461328 BOD1Q96IK1 185 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 SLC38A2Q96QD8 506 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 CDRT15Q96T59 188 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms