RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 KMT5CQ86Y97 462 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TIGD4Q8IY51 512 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TCTE3Q8IZS6 198 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CADM2Q8N3J6 435 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ZCCHC7Q8N3Z6 543 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 OR4N2Q8NGD1 307 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 OR52H1Q8NGJ2 320 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CLHC1Q8NHS4 586 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 HUS1BQ8NHY5 278 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 MAGEE2Q8TD90 523 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PYDC1Q8WXC3 89 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 FGF11Q92914 225 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TM4SF19Q96DZ7 209 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CMTM5Q96DZ9 223 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 RNF170Q96K19 258 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF285Q96NJ3 590 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 QRFPRQ96P65 431 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CSF3RQ99062 836 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ERVK-6Q9BXR3 956 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 BCL2L14Q9BZR8 327 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 OR10A4Q9H209 315 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 OR51V1Q9H2C8 321 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 OR51M1Q9H341 326 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 NANOGQ9H9S0 305 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PELI2Q9HAT8 420 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 MCCC2Q9HCC0 563 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 LHX9Q9NQ69 397 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 BIN3Q9NQY0 253 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 MED9Q9NWA0 146 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 AKAP7Q9P0M2 348 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ABI3Q9P2A4 366 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ABCD2Q9UBJ2 740 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 FBXL17Q9UF56 701 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ANAPC2Q9UJX6 822 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PRPF19Q9UMS4 504 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 SAMHD1Q9Y3Z3 626 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 KLK4Q9Y5K2 254 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 FKBP7Q9Y680 259 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TNRC6AQ8NDV7 1962 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 NUP214P35658 2090 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 NAV3Q8IVL0 2385 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 A0A087WV48 116 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 A0A1W2PPW3 197 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LRIT2A6NDA9 550 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM90A8PA6NJQ4 464 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 GLOD5A6NK44 160 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 A8MUA0 341 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LINC00587B1AMM8 73 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 H0YIV9 168 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 J3QRK9 145 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 MANBAO00462 879 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 UBE2CO00762 179 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 ERI3O43414 337 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 CHST10O43529 356 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 B4GALT2O60909 372 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 NME6O75414 186 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC25A12O75746 678 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 UPK1BO75841 260 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 NEURL1O76050 574 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 CLDN9O95484 217 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SERPINA5P05154 406 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LCKP06239 509 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 HOXB5P09067 269 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 FBP1P09467 338 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM90A13PP0C7W8 464 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM90A24PP0C7X0 464 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 TCN2P20062 427 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 PPP2R1BP30154 601 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 OTX2P32243 289 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 DLSTP36957 453 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 CD79BP40259 229 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC15A1P46059 708 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 VEGFCP49767 419 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 P2RY4P51582 365 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC7A2P52569 658 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RIDAP52758 137 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RAB25P57735 213 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RPS15AP62244 130 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 BTN3A2P78410 334 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 BTG2P78543 158 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 IL1RL1Q01638 556 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF91Q05481 1191 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RGS1Q08116 209 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 BST1Q10588 318 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 STX4Q12846 297 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 FADDQ13158 208 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 EIF3IQ13347 325 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 FLOT2Q14254 428 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 IL11RAQ14626 422 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 ABRAXAS2Q15018 415 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 DGUOKQ16854 277 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 NKAIN1Q4KMZ8 207 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 CDKL4Q5MAI5 379 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LPCAT4Q643R3 524 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 MED27Q6P2C8 311 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LANCL3Q6ZV70 420 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC22A16Q86VW1 577 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 NUDCD3Q8IVD9 361 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LINC00346Q8IVM7 164 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 OR4N5Q8IXE1 308 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms