RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ROR2Q01974 943 aaKnown RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 GABRA6Q16445 453 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 IQCCQ4KMZ1 466 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 C1orf146Q5VVC0 180 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 DPY19L2P2Q6ZN68 376 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 ZNF627Q7L945 461 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 OR1K1Q8NGR3 316 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 ASB10Q8WXI3 467 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 TEX12Q9BXU0 123 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 POLDIP3Q9BY77 421 aaKnown RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 KCNN2Q9H2S1 579 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 C1orf198Q9H425 327 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 CCM2LQ9NUG4 571 aaPredicted RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 C11orf98E9PRG8 122 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 HPRP00739 348 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 IFNGR1P15260 489 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 ACADSP16219 412 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 CBLP22681 906 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 RPL4P36578 427 aaKnown RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 ZNF133P52736 654 aaPredicted RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 MS4A2Q01362 244 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 C1orf94Q6P1W5 598 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 ZFP1Q6P2D0 407 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 FAM86B1Q8N7N1 296 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 DGCR6LQ9BY27 220 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 RASSF1Q9NS23 344 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 GLTPQ9NZD2 209 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 RHCGQ9UBD6 479 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 ASPMQ8IZT6 3477 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 KLK2P20151 261 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 PTAFRP25105 342 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 DNAJA1P31689 397 aaKnown RBP9.42□□□□□ -0.9
UBR4-208ENST00000459947 CCKARP32238 428 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 TSEN54Q7Z6J9 526 aaKnown RBP9.42□□□□□ -0.9
UBR4-208ENST00000459947 S100PBPQ96BU1 408 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 WFIKKN1Q96NZ8 548 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 KCNS3Q9BQ31 491 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 CHID1Q9BWS9 393 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 SLC7A8Q9UHI5 535 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 LYVE1Q9Y5Y7 322 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 DOPEY2Q9Y3R5 2298 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 ZNF99A8MXY4 864 aaPredicted RBP9.42□□□□□ -0.9
UBR4-208ENST00000459947 PIP5K1CO60331 668 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 PTHP01270 115 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 NPR2P20594 1047 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 MSX2P35548 267 aaPredicted RBP9.42□□□□□ -0.9
UBR4-208ENST00000459947 AQP2P41181 271 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 OMPP47874 163 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 LIMS1P48059 325 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 SELENOPP49908 381 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 CTXN1P60606 82 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 THEM4Q5T1C6 240 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 TMEM108Q6UXF1 575 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 NHLRC1Q6VVB1 395 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 TMEM200AQ86VY9 491 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 LINC01560Q8TB33 94 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 NINJ1Q92982 152 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 DNAJA3Q96EY1 480 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 ZNF556Q9HAH1 456 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 VSTM5A8MXK1 200 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 FKBP6O75344 327 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 CST1P01037 141 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 CD3EP07766 207 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 ANXA8P13928 327 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 GSSP48637 474 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 CBX1P83916 185 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 C10orf128Q5T292 105 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 TMEM53Q6P2H8 277 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 SMARCD3Q6STE5 483 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 SEZ6L2Q6UXD5 910 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 ZNF775Q96BV0 537 aaPredicted RBP9.42□□□□□ -0.9
UBR4-208ENST00000459947 CLPTM1LQ96KA5 538 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 C20orf141Q9NUB4 165 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 GRHPRQ9UBQ7 328 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 CDH10Q9Y6N8 788 aa9.42□□□□□ -0.9
UBR4-208ENST00000459947 HELZ2Q9BYK8 2649 aaKnown RBP9.42□□□□□ -0.9
UBR4-208ENST00000459947 TRBV4-1A0A0J9YWV2 114 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 E2F6O75461 281 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 UBL3O95164 117 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 TXNDC12O95881 172 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ITGA5P08648 1049 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 WFDC8Q8IUA0 241 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 FANK1Q8TC84 345 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 BCL2L2Q92843 193 aaPredicted RBP9.41□□□□□ -0.9
UBR4-208ENST00000459947 ARPC3O15145 178 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 DHHO43323 396 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 LYZL6O75951 148 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 MAKP20794 623 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ARR3P36575 388 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ACKR1Q16570 336 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 MICAQ29983 383 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ADAM5Q6NVV9 412 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 RASSF6Q6ZTQ3 369 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ASRGL1Q7L266 308 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ARIH2OSQ8N7S6 290 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms