RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SLC35D2Q76EJ3 337 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 CYP4Z1Q86W10 505 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 RNF113BQ8IZP6 322 aaKnown RBP15.17■□□□□ 0.02
USP39-208ENST00000455732 ARHGAP24Q8N264 748 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 OR6X1Q8NH79 312 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 ACOT11Q8WXI4 607 aaPredicted RBP15.17■□□□□ 0.02
USP39-208ENST00000455732 AKAP1Q92667 903 aaKnown RBP eCLIP15.17■□□□□ 0.02
USP39-208ENST00000455732 BCL2L2Q92843 193 aaPredicted RBP15.17■□□□□ 0.02
USP39-208ENST00000455732 RADILQ96JH8 1075 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 C7orf34Q96L11 122 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 EMC6Q9BV81 110 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 NELFAQ9H3P2 528 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 CRLF2Q9HC73 371 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 MOV10Q9HCE1 1003 aaKnown RBP15.17■□□□□ 0.02
USP39-208ENST00000455732 MGAT4BQ9UQ53 548 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 NIPBLQ6KC79 2804 aaeCLIP15.17■□□□□ 0.02
USP39-208ENST00000455732 A0A1W2PR80 420 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 NPIPB13A6NJU9 1138 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 ZNF726A6NNF4 738 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 ZNF99A8MXY4 864 aaPredicted RBP15.16■□□□□ 0.02
USP39-208ENST00000455732 NPIPB4C9JG80 1138 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 ARPC2O15144 300 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 CLOCKO15516 846 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 PIP5K1CO60331 668 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 SEMG1P04279 462 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 CDH2P19022 906 aaPredicted RBP15.16■□□□□ 0.02
USP39-208ENST00000455732 CD40P25942 277 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 ZNF83P51522 516 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 RPL18Q07020 188 aaKnown RBP15.16■□□□□ 0.02
USP39-208ENST00000455732 CEACAM16Q2WEN9 425 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 ZNF672Q499Z4 452 aaPredicted RBP15.16■□□□□ 0.02
USP39-208ENST00000455732 PHYHD1Q5SRE7 291 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 ZNF627Q7L945 461 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 WDFY1Q8IWB7 410 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 FAM86B1Q8N7N1 296 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 KBTBD8Q8NFY9 601 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 BPIFA2Q96DR5 249 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 B3GAT2Q9NPZ5 323 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 NDUFAF4Q9P032 175 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 RHCGQ9UBD6 479 aa15.16■□□□□ 0.02
USP39-208ENST00000455732 A0A1W2PRQ8 180 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 B2RBV5 119 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 SHISA9B4DS77 424 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 BLOC1S5-TXNDC5H3BN57 136 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 M0R3G1 203 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 ABCD4O14678 606 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 SERPINI2O75830 405 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 T-ENOLP0DO92 83 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 RHCEP18577 417 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 BIDP55957 195 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 RPS4XP62701 263 aaKnown RBP15.15■□□□□ 0.02
USP39-208ENST00000455732 ARF1P84077 181 aaKnown RBP15.15■□□□□ 0.02
USP39-208ENST00000455732 PRKCDQ05655 676 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 CAMK2DQ13557 499 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 DGCR6Q14129 220 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 C3orf36Q3SXR2 165 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 CARD17Q5XLA6 110 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 MBOAT2Q6ZWT7 520 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 NRMQ8IXM6 262 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 FAM169BQ8N8A8 192 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 TMEM54Q969K7 222 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 FBXW5Q969U6 566 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 ZNF837Q96EG3 531 aaPredicted RBP15.15■□□□□ 0.02
USP39-208ENST00000455732 SLC25A44Q96H78 314 aaPredicted RBP15.15■□□□□ 0.02
USP39-208ENST00000455732 POM121Q96HA1 1249 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 PYURFQ96I23 114 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 DHRS1Q96LJ7 313 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 NSMCE2Q96MF7 247 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 GSX2Q9BZM3 304 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 NMNAT1Q9HAN9 279 aaPredicted RBP15.15■□□□□ 0.02
USP39-208ENST00000455732 CRNNQ9UBG3 495 aaPredicted RBP15.15■□□□□ 0.02
USP39-208ENST00000455732 HIF3AQ9Y2N7 669 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 ZANQ9Y493 2812 aa15.15■□□□□ 0.02
USP39-208ENST00000455732 A0A087WUU8 490 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 CENPBD1B2RD01 187 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 M0R1B8 84 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 ARHGEF9O43307 516 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 IFI30P13284 250 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 PAX1P15863 534 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 ITGA2P17301 1181 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 CSNK1A1P48729 337 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 UBE2NP61088 152 aaKnown RBP15.14■□□□□ 0.01
USP39-208ENST00000455732 LSM11P83369 360 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP39-208ENST00000455732 VLDLRP98155 873 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 ANKDD1AQ495B1 522 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 IQCCQ4KMZ1 466 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 Q5PR19 223 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 ZNF730Q6ZMV8 503 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 HDDC2Q7Z4H3 204 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 CCDC36Q8IYA8 594 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 OR6N1Q8NGY5 312 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 SLC7A13Q8TCU3 470 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 BCAS4Q8TDM0 211 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 NEUROG1Q92886 237 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 ZNF566Q969W8 418 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 SEPHS2Q99611 448 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 ULBP2Q9BZM5 246 aa15.14■□□□□ 0.01
USP39-208ENST00000455732 FAM32AQ9Y421 112 aaKnown RBP15.14■□□□□ 0.01
USP39-208ENST00000455732 A0A096LPE4 126 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 A0A1W2PPZ6 126 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms