RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CDC42P60953 191 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 ERVK-25P63136 954 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 TEKQ02763 1124 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 C1DQ13901 141 aaKnown RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 STK11Q15831 433 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 HIST3H3Q16695 136 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 MESTQ5EB52 335 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 ZNF691Q5VV52 312 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 FAM214BQ7L5A3 538 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 P4HA3Q7Z4N8 544 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 IGFN1Q86VF2 1251 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 CCDC71Q8IV32 467 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 TMEM123Q8N131 208 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 DEPDC4Q8N2C3 294 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 OR8J1Q8NGP2 316 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 FNDC8Q8TC99 324 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 FBLIM1Q8WUP2 373 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 INTS12Q96CB8 462 aaKnown RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 SLC25A44Q96H78 314 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 Q96M85 177 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 ERMAPQ96PL5 475 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 SLC38A2Q96QD8 506 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 KCNK17Q96T54 332 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 ANKRD60Q9BZ19 345 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 LINC00470Q9BZP3 86 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 VSX1Q9NZR4 365 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 FOXD3Q9UJU5 478 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 LRRC42Q9Y546 428 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 GMPPBQ9Y5P6 360 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 IER3IP1Q9Y5U9 82 aa9.99□□□□□ -0.81
TRAF4-206ENST00000454852 PHF3Q92576 2039 aaKnown RBP9.99□□□□□ -0.81
TRAF4-206ENST00000454852 ZFYVE26Q68DK2 2539 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TEX13CA0A0J9YWL9 993 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 SLC35F4A4IF30 521 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 DENRO43583 198 aaKnown RBP9.98□□□□□ -0.81
TRAF4-206ENST00000454852 MPZL2O60487 215 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 CNOT4O95628 575 aaKnown RBP9.98□□□□□ -0.81
TRAF4-206ENST00000454852 IL18BPO95998 194 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 PLGP00747 810 aaPredicted RBP9.98□□□□□ -0.81
TRAF4-206ENST00000454852 IFNGP01579 166 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 PGA4P0DJD7 388 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 PGA3P0DJD8 388 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 NR2C1P13056 603 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 ACADSP16219 412 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 HIST1H1CP16403 213 aaKnown RBP9.98□□□□□ -0.81
TRAF4-206ENST00000454852 GABRB1P18505 474 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 AGTR1P30556 359 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 NTF4P34130 210 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 ACVR1BP36896 505 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 PCYT1AP49585 367 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 SLC25A1P53007 311 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 CASP6P55212 293 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 CLDN17P56750 224 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 ISL1P61371 349 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 SNRPGP62308 76 aaKnown RBP9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TLE1Q04724 770 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 KRR1Q13601 381 aaKnown RBP9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TMEM201Q5SNT2 666 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TMEM236Q5W0B7 351 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TMEM211Q6ICI0 200 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 CASP12Q6UXS9 341 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 MCEMP1Q8IX19 187 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TUSC5Q8IXB3 177 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 FAM26EQ8N5C1 309 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 IQCF1Q8N6M8 205 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 NPEPL1Q8NDH3 523 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 SETD9Q8NE22 299 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 OR6K3Q8NGY3 331 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TMEM54Q969K7 222 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TXNDC15Q96J42 360 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 OR2M2Q96R28 347 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 APOL4Q9BPW4 351 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 NMNAT2Q9BZQ4 307 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 MED29Q9NX70 200 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 TINAGQ9UJW2 476 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 MEMO1Q9Y316 297 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 ZGRF1Q86YA3 2104 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 DOCK7Q96N67 2140 aa9.98□□□□□ -0.81
TRAF4-206ENST00000454852 SMG1Q96Q15 3661 aaKnown RBP9.98□□□□□ -0.81
TRAF4-206ENST00000454852 KALRNO60229 2985 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 MED12LQ86YW9 2145 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 PRSS37A4D1T9 235 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 ZNF726A6NNF4 738 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 RIIAD1A6NNX1 92 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 HSPB2A8KAH6 182 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 XKRYO14609 159 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 TRMUO75648 421 aaKnown RBP9.97□□□□□ -0.81
TRAF4-206ENST00000454852 TNFSF13O75888 250 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 IL2RAP01589 272 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 IGHG1P01857 330 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 ZNF3P17036 446 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 MYF6P23409 242 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 NOS3P29474 1203 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 CDKN2AP42771 156 aaKnown RBP9.97□□□□□ -0.81
TRAF4-206ENST00000454852 KIR2DL2P43627 348 aaPredicted RBP9.97□□□□□ -0.81
TRAF4-206ENST00000454852 OR3A2P47893 321 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 BIDP55957 195 aa9.97□□□□□ -0.81
TRAF4-206ENST00000454852 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms