RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 UTP4Q969X6 686 aaKnown RBP24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 ZC3HAV1LQ96H79 300 aaKnown RBP24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 GPA33Q99795 319 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 PTP4A3O75365 173 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 RAD51DO75771 328 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 PRPS1P60891 318 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 ROR2Q01974 943 aaKnown RBP24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 TGFBR3Q03167 851 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 MELKQ14680 651 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 TIMM23BQ5SRD1 257 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 PHYHD1Q5SRE7 291 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 C9orf135Q5VTT2 229 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 OR7E24Q6IFN5 339 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 P2RY8Q86VZ1 359 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 GPR137CQ8N3F9 429 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 C1orf162Q8NEQ5 155 aaPredicted RBP24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 BOD1Q96IK1 185 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 MCCC2Q9HCC0 563 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 CCM2LQ9NUG4 571 aaPredicted RBP24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 VNN3Q9NY84 501 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 SIGLEC7Q9Y286 467 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 FBN2P35556 2912 aa24.6■■□□□ 1.53
SMARCC1-203ENST00000454240 OR5H1A6NKK0 313 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 OR10H3O60404 316 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 CTAG2O75638 210 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 GOSR1O95249 250 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 ZNF26P17031 533 aaPredicted RBP24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 ERFP50548 548 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 TAB1Q15750 504 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 ACKR1Q16570 336 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 C1orf94Q6P1W5 598 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 ASB10Q8WXI3 467 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 SLCO4A1Q96BD0 722 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 SLC25A44Q96H78 314 aaPredicted RBP24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 TXNIPQ9H3M7 391 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 REEP1Q9H902 201 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 GPR35Q9HC97 309 aa24.59■■□□□ 1.53
SMARCC1-203ENST00000454240 CST1P01037 141 aa24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 IFNGR2P38484 337 aa24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 DAP3P51398 398 aaKnown RBP24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 ARMC4Q5T2S8 1044 aa24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 C1orf146Q5VVC0 180 aa24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 HMBOX1Q6NT76 420 aa24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 LINC00471Q8N535 108 aa24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 TMEM54Q969K7 222 aa24.58■■□□□ 1.53
SMARCC1-203ENST00000454240 M0R3G1 203 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 SIAH2O43255 324 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 FKBP6O75344 327 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 IGHMP01871 453 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 PGA4P0DJD7 388 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 PGA3P0DJD8 388 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 CTXN1P60606 82 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 PPP1R8Q12972 351 aaKnown RBP24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 TAF11Q15544 211 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 PGBD2Q6P3X8 592 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 IGFN1Q86VF2 1251 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 C17orf78Q8N4C9 275 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 OR6N1Q8NGY5 312 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 ZNF566Q969W8 418 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 ZNF837Q96EG3 531 aaPredicted RBP24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 RSRC1Q96IZ7 334 aaKnown RBP24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 MRPL13Q9BYD1 178 aaKnown RBP24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 YY1AP1Q9H869 796 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 CRLF2Q9HC73 371 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 RASSF1Q9NS23 344 aa24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 SAMHD1Q9Y3Z3 626 aaKnown RBP24.57■■□□□ 1.52
SMARCC1-203ENST00000454240 UNC119BA6NIH7 251 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 CYSRT1A8MQ03 144 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 DEFB108AA8MXU0 73 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 MCIDASD6RGH6 385 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 FPR3P25089 353 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 GSSP48637 474 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 CSNK1A1P48729 337 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 RUNX1T1Q06455 604 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 GK3PQ14409 553 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 STK11Q15831 433 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 CEACAM16Q2WEN9 425 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 ZNF770Q6IQ21 691 aaPredicted RBP24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 SSX8Q7RTT4 187 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 HDDC2Q7Z4H3 204 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 OR1K1Q8NGR3 316 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 GNPDA2Q8TDQ7 276 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 B3GAT2Q9NPZ5 323 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 GLTPQ9NZD2 209 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 ZNF346Q9UL40 294 aaKnown RBP24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 U3KQV3 271 aa24.56■■□□□ 1.52
SMARCC1-203ENST00000454240 CENPBD1B2RD01 187 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 TRMUO75648 421 aaKnown RBP24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 CCNB2O95067 398 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 IGHG1P01857 330 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 HRGP04196 525 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 ACADSP16219 412 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 CDH2P19022 906 aaPredicted RBP24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 SH3BGRP55822 239 aaPredicted RBP24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 FXYD6P3P58550 94 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 RPL27P61353 136 aaKnown RBP24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 CCNIQ14094 377 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 HIST3H3Q16695 136 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 MICAQ29983 383 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 SEZ6L2Q6UXD5 910 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms