RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SLC7A7Q9UM01 511 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 POFUT2Q9Y2G5 429 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHD3-206ENST00000452447 FBP2O00757 339 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 LY6HO94772 140 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 CH25HO95992 272 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 HIST1H2ABP04908 130 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 CD79AP11912 226 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 CALCRP30988 508 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 CSNK1A1P48729 337 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 LOXL1Q08397 574 aaPredicted RBP11.19□□□□□ -0.62
CHD3-206ENST00000452447 ADIPOQQ15848 244 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 GSG1Q2KHT4 349 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 TMEM249Q2WGJ8 235 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 ZNF813Q6ZN06 617 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 HIST3H2AQ7L7L0 130 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 MDP1Q86V88 176 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 NUP37Q8NFH4 326 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 OR4D11Q8NGI4 311 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 HIST1H2ACQ93077 130 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 SEC61A2Q9H9S3 476 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 FBXO9Q9UK97 447 aaPredicted RBP11.19□□□□□ -0.62
CHD3-206ENST00000452447 SH3GLB1Q9Y371 365 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 SVEP1Q4LDE5 3571 aa11.19□□□□□ -0.62
CHD3-206ENST00000452447 A8MV72 311 aaPredicted RBP11.18□□□□□ -0.62
CHD3-206ENST00000452447 KIAA1324LA8MWY0 1029 aaPredicted RBP11.18□□□□□ -0.62
CHD3-206ENST00000452447 KPNA4O00629 521 aaPredicted RBP11.18□□□□□ -0.62
CHD3-206ENST00000452447 NPPAP01160 153 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 HLA-HP01893 362 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 UMPSP11172 480 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 IFNGR1P15260 489 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 PDLIM4P50479 330 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 GZMMP51124 257 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 BIDP55957 195 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 HGFACQ04756 655 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 SF3A3Q12874 501 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHD3-206ENST00000452447 MAPRE2Q15555 327 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 ZNF74Q16587 644 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 RABL3Q5HYI8 236 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 COQ5Q5HYK3 327 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 WDR88Q6ZMY6 472 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 CCDC80Q76M96 950 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 MYPOPQ86VE0 399 aaPredicted RBP11.18□□□□□ -0.62
CHD3-206ENST00000452447 C10orf105Q8TEF2 133 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 NANOS1Q8WY41 292 aaKnown RBP11.18□□□□□ -0.62
CHD3-206ENST00000452447 SORCS2Q96PQ0 1159 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 SLC19A3Q9BZV2 496 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 RAB1BQ9H0U4 201 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 PCDHAC1Q9H158 963 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 ZNF442Q9H7R0 627 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 FGFR1OP2Q9NVK5 253 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 BAG5Q9UL15 447 aa11.18□□□□□ -0.62
CHD3-206ENST00000452447 A0A096LNT2 108 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 IGHV2OR16-5A0A0B4J2B6 119 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 ZNF503-AS2A6NEH8 195 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 BBIP1A8MTZ0 92 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 MRASO14807 208 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 RNF13O43567 381 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 IFNA14P01570 189 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 THY1P04216 161 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 ERCC1P07992 297 aaPredicted RBP11.17□□□□□ -0.62
CHD3-206ENST00000452447 B4GALT1P15291 398 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 NPR2P20594 1047 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 USF1P22415 310 aaPredicted RBP11.17□□□□□ -0.62
CHD3-206ENST00000452447 THBS4P35443 961 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 TAS2R41P59536 307 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 PIGFQ07326 219 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 KLF10Q13118 480 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 EFNB3Q15768 340 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 CARTPTQ16568 116 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 ERICH5Q6P6B1 374 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 NHLRC1Q6VVB1 395 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 SLC35D2Q76EJ3 337 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 ANKS4BQ8N8V4 417 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 PCYOX1LQ8NBM8 494 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 OR6X1Q8NH79 312 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 FOXB1Q99853 325 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 PIMREGQ9BSJ6 248 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 PLK3Q9H4B4 646 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 SAR1AQ9NR31 198 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 B3GNT2Q9NY97 397 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 TAS2R5Q9NYW4 299 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 ZNF229Q9UJW7 825 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 CUBNO60494 3623 aa11.17□□□□□ -0.62
CHD3-206ENST00000452447 LOC100653049A0A140TA62 436 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 NDUFS8O00217 210 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 KRT34O76011 436 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 PPOXP50336 477 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 VLDLRP98155 873 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 ZP4Q12836 540 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 SNTB2Q13425 540 aaKnown RBP11.16□□□□□ -0.62
CHD3-206ENST00000452447 DAG1Q14118 895 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 REP15Q6BDI9 236 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 ZNF627Q7L945 461 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 SPATA21Q7Z572 469 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 TSPYL5Q86VY4 417 aaPredicted RBP11.16□□□□□ -0.62
CHD3-206ENST00000452447 CARM1Q86X55 608 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 CALHM3Q86XJ0 350 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms