RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GID4Q8IVV7 300 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 ZNF786Q8N393 782 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 SDR9C7Q8NEX9 313 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 RFKQ969G6 155 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 ZNF582Q96NG8 517 aaPredicted RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 KCNK17Q96T54 332 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 NMNAT3Q96T66 252 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 TUBA1CQ9BQE3 449 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 MRPL13Q9BYD1 178 aaKnown RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 ZNF696Q9H7X3 374 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 KLHL13Q9P2N7 655 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 ING1Q9UK53 422 aaPredicted RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 CAMK2AQ9UQM7 478 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 PRSS37A4D1T9 235 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 OR6C68A6NDL8 312 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 SNTNA6NMZ2 147 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 XKRYO14609 159 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 SLC2A5P22732 501 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 ACVR2AP27037 513 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 ACVR1BP36896 505 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 TMED1Q13445 227 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 C1DQ13901 141 aaKnown RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 C3AR1Q16581 482 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 SMN1Q16637 294 aaKnown RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 NIPAL3Q6P499 406 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 C19orf48Q6RUI8 117 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 CHMP1BQ7LBR1 199 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 JAZF1Q86VZ6 243 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 CISD2Q8N5K1 135 aaKnown RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 ZIC4Q8N9L1 334 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 ROBO4Q8WZ75 1007 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 SNRNP40Q96DI7 357 aaKnown RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 TXNDC15Q96J42 360 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 BCO1Q9HAY6 547 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 GP6Q9HCN6 339 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 MED29Q9NX70 200 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 DNAJC27Q9NZQ0 273 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 KLHL9Q9P2J3 617 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 CLCF1Q9UBD9 225 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 BLOC1S6Q9UL45 172 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPS28-202ENST00000449223 RCE1Q9Y256 329 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 FLVCR1Q9Y5Y0 555 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 GTF3C1Q12789 2109 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 CLCA1A8K7I4 914 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 AHRRA9YTQ3 701 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 NPIPA2E9PIF3 369 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 NPIPA3F8WFD2 350 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 SERPINI2O75830 405 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 ZNF432O94892 652 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 FCGR2AP12318 317 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 FMO3P31513 532 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 SLC15A1P46059 708 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 GABARAPL2P60520 117 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 MELKQ14680 651 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 RNPS1Q15287 305 aaKnown RBP17.15■□□□□ 0.34
RPS28-202ENST00000449223 PLBD1Q6P4A8 553 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 LEG1Q6P5S2 330 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 FNDC9Q8TBE3 224 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 TMEM45BQ96B21 275 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 SLC25A44Q96H78 314 aaPredicted RBP17.15■□□□□ 0.34
RPS28-202ENST00000449223 HCAR1Q9BXC0 346 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 DUSP21Q9H596 190 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 MRPS18AQ9NVS2 196 aaKnown RBP17.15■□□□□ 0.34
RPS28-202ENST00000449223 FKBP14Q9NWM8 211 aa17.15■□□□□ 0.34
RPS28-202ENST00000449223 ATRXP46100 2492 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 FAM183AA6NL82 134 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 GPR171O14626 319 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 ARHGEF9O43307 516 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 LYNP07948 512 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 PIPP12273 146 aaPredicted RBP17.14■□□□□ 0.33
RPS28-202ENST00000449223 HTR1FP30939 366 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 BIDP55957 195 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 RUNX1T1Q06455 604 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 RASGEF1BQ0VAM2 473 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 HIST3H3Q16695 136 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 BCDIN3DQ7Z5W3 292 aaKnown RBP17.14■□□□□ 0.33
RPS28-202ENST00000449223 WDFY1Q8IWB7 410 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 CYB561A3Q8NBI2 242 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 BPIFB6Q8NFQ5 453 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 ABHD3Q8WU67 409 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 ZNF385AQ96PM9 386 aaKnown RBP17.14■□□□□ 0.33
RPS28-202ENST00000449223 ALG12Q9BV10 488 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 CNOT2Q9NZN8 540 aaKnown RBP17.14■□□□□ 0.33
RPS28-202ENST00000449223 TPRKBQ9Y3C4 175 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 RPL36Q9Y3U8 105 aaKnown RBP17.14■□□□□ 0.33
RPS28-202ENST00000449223 SVILO95425 2214 aa17.14■□□□□ 0.33
RPS28-202ENST00000449223 SLC22A23A1A5C7 686 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 SLC35F4A4IF30 521 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 MAGEA13PA6NCF6 341 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 SLC22A31A6NKX4 558 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 ZNF724A8MTY0 619 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 AKAP8O43823 692 aaKnown RBP17.13■□□□□ 0.33
RPS28-202ENST00000449223 XPNPEP2O43895 674 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 AQP8O94778 261 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 RENP00797 406 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 PGA4P0DJD7 388 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 PGA3P0DJD8 388 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 PTGS2P35354 604 aa17.13■□□□□ 0.33
RPS28-202ENST00000449223 PTGER4P35408 488 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms