RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TIMM23BQ5SRD1 257 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 SWT1Q5T5J6 900 aaKnown RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 C3orf33Q6P1S2 294 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 TTC33Q6PID6 262 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 ZNF730Q6ZMV8 503 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 CXXC5Q7LFL8 322 aaKnown RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 NRMQ8IXM6 262 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 OR9Q2Q8NGE9 314 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 TMEM239Q8WW34 195 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 RADILQ96JH8 1075 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 OR5B2Q96R09 309 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 ZNF426Q9BUY5 554 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 C12orf10Q9HB07 376 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 FAIMQ9NVQ4 179 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 CISD1Q9NZ45 108 aaKnown RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 CYTIPO60759 359 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 NPIPB7O75200 414 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 E2F6O75461 281 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 IMPDH2P12268 514 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 FCGR1AP12314 374 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 FKBP2P26885 142 aaKnown RBP12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 IFNA8P32881 189 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 GPR4P46093 362 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 HMGA2P52926 109 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 KRTAP1-1Q07627 177 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 PPA1Q15181 289 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 PGGHGQ32M88 737 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 TMPPEQ6ZT21 453 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 EPHX4Q8IUS5 362 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 OR4K5Q8NGD3 323 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 ACOT11Q8WXI4 607 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 TAAR8Q969N4 342 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 MPP4Q96JB8 637 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 MOGAT1Q96PD6 335 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 PTDSS2Q9BVG9 487 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 SLCO5A1Q9H2Y9 848 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 ING1Q9UK53 422 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 MED31Q9Y3C7 131 aa12.1□□□□□ -0.47
PDLIM2-213ENST00000448520 A8MVM7 634 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 PDLIM1O00151 329 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 MGRN1O60291 552 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 AHSA1O95433 338 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 CH25HO95992 272 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 IFNA2P01563 188 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 IFI30P13284 250 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 HOXB6P17509 224 aaKnown RBP12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 MAKP20794 623 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 SMIM11AP58511 58 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 CSNK2A1P68400 391 aaPredicted RBP12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 PDK3Q15120 406 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 C1orf140Q5VVS0 124 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 MBOAT2Q6ZWT7 520 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 SLC46A3Q7Z3Q1 461 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 DTX2Q86UW9 622 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 C10orf53Q8N6V4 93 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 LRRC17Q8N6Y2 441 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 OR10G2Q8NGC3 310 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 SLC25A43Q8WUT9 341 aaPredicted RBP12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 SLC25A36Q96CQ1 311 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 CENPNQ96H22 339 aaPredicted RBP12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 FAM46AQ96IP4 442 aaKnown RBP12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 HS6ST2Q96MM7 605 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 EPYCQ99645 322 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 GPA33Q99795 319 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 TMEM43Q9BTV4 400 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 TRAF4Q9BUZ4 470 aaPredicted RBP12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 ANKRD19PQ9H560 264 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 SEC14L4Q9UDX3 406 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 TMCC3Q9ULS5 477 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 MGAT4BQ9UQ53 548 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 CR1P17927 2039 aa12.09□□□□□ -0.47
PDLIM2-213ENST00000448520 IGHV3-15A0A0B4J1V0 119 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 SULT2B1O00204 365 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 ZNF208O43345 1280 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 CD5LO43866 347 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 OR10H3O60404 316 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 LYZL6O75951 148 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 CCNB2O95067 398 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 ATP6V1G2O95670 118 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 CD8AP01732 235 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 BGLAPP02818 100 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 ZNF23P17027 643 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 ACVR1BP36896 505 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 CDKN1AP38936 164 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 RBM34P42696 430 aaKnown RBP12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 OMPP47874 163 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 FAPQ12884 760 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 OR7A5Q15622 319 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 STK11Q15831 433 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 MICAQ29983 383 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 OTUD3Q5T2D3 398 aaPredicted RBP12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 AGAP6Q5VW22 663 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 LPCAT4Q643R3 524 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms