RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 GATSQ8NAP1 163 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 PPTC7Q8NI37 304 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 CHRNA10Q9GZZ6 450 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 DOK5Q9P104 306 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 NKX1-2Q9UD57 310 aaPredicted RBP8.34□□□□□ -1.08
NIPBL-202ENST00000448238 WDR62O43379 1518 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TMX2-CTNND1H3BSU7 103 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 RGS13O14921 159 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SIX3O95343 332 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-202ENST00000448238 RPLP1P05386 114 aaKnown RBP8.33□□□□□ -1.08
NIPBL-202ENST00000448238 GLAP06280 429 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 AKR1C3P42330 323 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ARSDP51689 593 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 DAOAP59103 153 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 GPR18Q14330 331 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 C2orf27AQ580R0 203 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 CD276Q5ZPR3 534 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 LETMD1Q6P1Q0 360 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 C15orf52Q6ZUT6 534 aaKnown RBP8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ACOT7LQ6ZUV0 252 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF485Q8NCK3 441 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR10P1Q8NGE3 313 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR4D10Q8NGI6 311 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TAS2R38P59533 333 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 HBA1P69905 142 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 IRF9Q00978 393 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 C5orf46Q6UWT4 87 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 LRRN4CLQ8ND94 238 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR52B6Q8NGF0 335 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 MS4A10Q96PG2 267 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SPEF2Q9C093 1822 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TSPAN13O95857 204 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 GBAP04062 536 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 CA3P07451 260 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM107Q6UX40 140 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 DTWD2Q8NBA8 298 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR52R1Q8NGF1 315 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR51A4Q8NGJ6 313 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ST8SIA4Q92187 359 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 PINX1Q96BK5 328 aaKnown RBP8.33□□□□□ -1.08
NIPBL-202ENST00000448238 AMBRA1Q9C0C7 1298 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 FAM234AQ9H0X4 552 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 POLDIP2Q9Y2S7 368 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 A0A1B0GUH1 482 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TRABD2BA6NFA1 517 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 PPP1R3DO95685 299 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF628Q5EBL2 1059 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 Q6ZTK2 550 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SLC5A8Q8N695 610 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 CLRN3Q8NCR9 226 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 GPR152Q8TDT2 470 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SLC16A10Q8TF71 515 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 PHYHIPLQ96FC7 376 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 C4orf36Q96KX1 117 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 MAF1Q9H063 256 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 UBQLN3Q9H347 655 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 RCE1Q9Y256 329 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SLC43A1O75387 559 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ELLP55199 621 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-202ENST00000448238 C6orf136Q5SQH8 315 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 GLYATL3Q5SZD4 288 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TIFABQ6ZNK6 161 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 CSNK1A1LQ8N752 337 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 PWWP2AQ96N64 755 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 CHST11Q9NPF2 352 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 A0A0U1RQJ8 604 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM269A0A1B0GVZ9 245 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SOCS6O14544 535 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SEMA7AO75326 666 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 NAGAP17050 411 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF141Q15928 474 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TOR2AQ5JU69 321 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 C18orf63Q68DL7 685 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 MOB3CQ70IA8 216 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF761Q86XN6 746 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR10AD1Q8NGE0 317 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR10X1Q8NGY0 326 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 C1GALT1Q9NS00 363 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 F5P12259 2224 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF815PA8K554 130 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 GPR171O14626 319 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 B4GALT5O43286 388 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 HLA-DQB2P05538 268 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 CD200P41217 278 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 MEF2AQ02078 507 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-202ENST00000448238 ZP2Q05996 745 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 SSX1Q16384 188 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 TP53I3Q53FA7 332 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 AGBL4Q5VU57 503 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OTOP2Q7RTS6 562 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 PDZD3Q86UT5 571 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 DNAJC5GQ8N7S2 189 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 OR4K5Q8NGD3 323 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 NSG2Q9Y328 171 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 RNF11Q9Y3C5 154 aa8.33□□□□□ -1.08
NIPBL-202ENST00000448238 NSG1A0A0A6YYJ2 146 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 PRAMEF4O60810 478 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 FABP2P12104 132 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 PTBP1P26599 531 aaKnown RBP eCLIP8.32□□□□□ -1.081e-6■■■■■ 27.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms