RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 SLC25A43Q8WUT9 341 aaPredicted RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 ANKRD49Q8WVL7 239 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 IPCEF1Q8WWN9 437 aaPredicted RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 PIK3R3Q92569 461 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 NAP1L5Q96NT1 182 aaPredicted RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 ZNF385AQ96PM9 386 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 PRR25Q96S07 402 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TM2D3Q9BRN9 247 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 PCGF1Q9BSM1 259 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 QRSL1Q9H0R6 528 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 MYLK2Q9H1R3 596 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 PIF1Q9H611 641 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 ZMAT4Q9H898 229 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 UBQLN4Q9NRR5 601 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 EXD2Q9NVH0 621 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 MRPL15Q9P015 296 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 CTNNAL1Q9UBT7 734 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 SLC7A8Q9UHI5 535 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 DNAH2Q9P225 4427 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TTC36A6NLP5 189 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 ZNF879B4DU55 563 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 SLC25A17O43808 307 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 CCNT2O60583 730 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 UPK3AO75631 287 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 NUDT14O95848 222 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 LY6G6CO95867 125 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 THY1P04216 161 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 OR8G3PP0DMU2 310 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 GABRA3P34903 492 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 PHEXP78562 749 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 ZNF460Q14592 562 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 QPRTQ15274 297 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TRMT5Q32P41 509 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 GKAP1Q5VSY0 366 aaPredicted RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 LIPJQ5W064 366 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 RGS7BPQ6MZT1 257 aaPredicted RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 FAM45BPQ6NSW5 357 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 PAGE2Q7Z2X7 111 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 CCDC36Q8IYA8 594 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 CMTM4Q8IZR5 234 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 METTL4Q8N3J2 472 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TXLNBQ8N3L3 684 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 KIF18AQ8NI77 898 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 FAM45AQ8TCE6 357 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 C3orf30Q96M34 536 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 DCLRE1CQ96SD1 692 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 SERPINI1Q99574 410 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 MCRIP2Q9BUT9 160 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 MRPL1Q9BYD6 325 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 LINC00470Q9BZP3 86 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 NANOGQ9H9S0 305 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 C3orf14Q9HBI5 128 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TMEM106BQ9NUM4 274 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 GRHL1Q9NZI5 618 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 CARD8Q9Y2G2 431 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 HDGFL3Q9Y3E1 203 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 MAB21L2Q9Y586 359 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TNPO3Q9Y5L0 923 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 A0A1B0GVY2 172 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 MFAP3LO75121 409 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 SKAP2O75563 359 aaPredicted RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 DNAJC8O75937 253 aaPredicted RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 KCNK2O95069 426 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 NKX2-2O95096 273 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 WISP3O95389 354 aaPredicted RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 IGHV3-13P01766 116 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 GYPCP04921 128 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 CD55P08174 381 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 FBP1P09467 338 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 CRHR1P34998 444 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 MDH2P40926 338 aaKnown RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 CETN2P41208 172 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 ZNF81P51508 661 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 MMP15P51511 669 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 TAS2R39P59534 338 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 SELENOVP59797 346 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 BASP1P80723 227 aaKnown RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 ARF1P84077 181 aaKnown RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 KLHL26Q53HC5 615 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 TMEM255AQ5JRV8 349 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 TEX35Q5T0J7 233 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 PRAMEF8Q5VWM4 474 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 PRAMEF7Q5VXH5 474 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 UNQ9370/PRO34162Q6UXP9 181 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 COMMD6Q7Z4G1 85 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 KLBQ86Z14 1044 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 FAM9CQ8IZT9 166 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 L3MBTL4Q8NA19 623 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 CPEB3Q8NE35 698 aaKnown RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 OR5W2Q8NH69 310 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 SYNPRQ8TBG9 265 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 NSMAFQ92636 917 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 ARL8AQ96BM9 186 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 MAELQ96JY0 434 aaKnown RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 CLPTM1LQ96KA5 538 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 DDOQ99489 341 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 SF3B5Q9BWJ5 86 aaKnown RBP2.63□□□□□ -1.99
PMS1-215ENST00000447232 SIRPDQ9H106 197 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 SEMA6AQ9H2E6 1030 aa2.63□□□□□ -1.99
PMS1-215ENST00000447232 ZNF702PQ9H963 129 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms