RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 LINC00114Q6XXX2 140 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF813Q6ZN06 617 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 TSPYL5Q86VY4 417 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-205ENST00000447041 RBM45Q8IUH3 476 aaKnown RBP15.74■□□□□ 0.11
COL9A1-205ENST00000447041 PHC2Q8IXK0 858 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 CDK20Q8IZL9 346 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 DPP10Q8N608 796 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 VANGL1Q8TAA9 524 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-205ENST00000447041 STON2Q8WXE9 905 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 LRR1Q96L50 414 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 MAGEB18Q96M61 343 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 ULBP2Q9BZM5 246 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 BPESC1Q9GZL8 116 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 EVA1AQ9H8M9 152 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 B3GNT2Q9NY97 397 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 COL6A5A8TX70 2615 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 TMEM129A0AVI4 362 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 C11orf98E9PRG8 122 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 LMX1BO60663 402 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 FMO6PO60774 539 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 CD79AP11912 226 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 APEHP13798 732 aaKnown RBP15.73■□□□□ 0.11
COL9A1-205ENST00000447041 GZMKP49863 264 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 PIGFQ07326 219 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 RBBP4Q09028 425 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 DAG1Q14118 895 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 GSG1Q2KHT4 349 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 IL17RELQ6ZVW7 336 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 PXKQ7Z7A4 578 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 CCDC36Q8IYA8 594 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 OR6N1Q8NGY5 312 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 OR5J2Q8NH18 312 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 MSI2Q96DH6 328 aaKnown RBP15.73■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF75AQ96N20 296 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 DOK1Q99704 481 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 BEX2Q9BXY8 128 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 RAB1BQ9H0U4 201 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 CHODLQ9H9P2 273 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 NPHS2Q9NP85 383 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 B3GAT2Q9NPZ5 323 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF224Q9NZL3 707 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 POFUT2Q9Y2G5 429 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 MXRA5Q9NR99 2828 aa15.73■□□□□ 0.11
COL9A1-205ENST00000447041 SH3PXD2BA1X283 911 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF726A6NNF4 738 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 HMGB1P1B2RPK0 211 aaPredicted RBP15.72■□□□□ 0.11
COL9A1-205ENST00000447041 LYPD3O95274 346 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 MT-ATP6P00846 226 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 IGFBP1P08833 259 aaPredicted RBP15.72■□□□□ 0.11
COL9A1-205ENST00000447041 ADORA3P0DMS8 318 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 IFNGR1P15260 489 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF14P17017 642 aaPredicted RBP15.72■□□□□ 0.11
COL9A1-205ENST00000447041 CD247P20963 164 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 BIDP55957 195 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 NFYCQ13952 458 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 MSMPQ1L6U9 139 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 IQCCQ4KMZ1 466 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF627Q7L945 461 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 ADAMTS16Q8TE57 1224 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 TAMM41Q96BW9 452 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 FOXB1Q99853 325 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 SOX7Q9BT81 388 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 REPIN1Q9BWE0 567 aaKnown RBP15.72■□□□□ 0.11
COL9A1-205ENST00000447041 SHARPINQ9H0F6 387 aa15.72■□□□□ 0.11
COL9A1-205ENST00000447041 KAT8Q9H7Z6 458 aaKnown RBP15.72■□□□□ 0.11
COL9A1-205ENST00000447041 MALRD1Q5VYJ5 2156 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 LOC100289279A0A1B0GTE1 492 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 KPNA4O00629 521 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-205ENST00000447041 PHF1O43189 567 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-205ENST00000447041 EDF1O60869 148 aaKnown RBP15.71■□□□□ 0.11
COL9A1-205ENST00000447041 STAMBPO95630 424 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 C8BP07358 591 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 DAOP14920 347 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 PCGF2P35227 344 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 PTDSS1P48651 473 aaKnown RBP15.71■□□□□ 0.11
COL9A1-205ENST00000447041 CSNK1A1P48729 337 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF74Q16587 644 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 FAM166AQ6J272 317 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 IL17RDQ8NFM7 739 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 OR10A6Q8NH74 314 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 DYNLRB1Q9NP97 96 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 LPAR3Q9UBY5 353 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 KCNS2Q9ULS6 477 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 SLC7A7Q9UM01 511 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 TRIM33Q9UPN9 1127 aa15.71■□□□□ 0.11
COL9A1-205ENST00000447041 A0A0G2JND7 137 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 LRP5LA4QPB2 252 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 CH25HO95992 272 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 ZNF23P17027 643 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 NR4A1P22736 598 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 GIPRP48546 466 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 CRYBA2P53672 197 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 MELKQ14680 651 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 TTC33Q6PID6 262 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-205ENST00000447041 SLC35D2Q76EJ3 337 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 PATL1Q86TB9 770 aaKnown RBP15.7■□□□□ 0.1
COL9A1-205ENST00000447041 LRRC17Q8N6Y2 441 aa15.7■□□□□ 0.1
COL9A1-205ENST00000447041 NEU4Q8WWR8 484 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-205ENST00000447041 MRPL37Q9BZE1 423 aaKnown RBP15.7■□□□□ 0.1
COL9A1-205ENST00000447041 TPK1Q9H3S4 243 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms