RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 GALNT16Q8N428 558 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 GAREM1Q9H706 876 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 HCFC1R1Q9NWW0 138 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 ICAM5Q9UMF0 924 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 CPED1A4D0V7 1026 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 ICOSLGO75144 302 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 CTAG2O75638 210 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 SLC35G4P0C7Q5 338 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 AKR1C3P42330 323 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 ARFIP1P53367 373 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 FHL1Q13642 323 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 ARHGAP11BQ3KRB8 267 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 OR5AK2Q8NH90 309 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 IRF7Q92985 503 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 LINC00615Q96LM1 132 aaPredicted RBP12.73□□□□□ -0.37
VPS52-212ENST00000445902 FLRT3Q9NZU0 649 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 KLHDC2Q9Y2U9 406 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 DNAJB6O75190 326 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ALOX12BO75342 701 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 SOD2P04179 222 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 AMY2AP04746 511 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 PCCBP05166 539 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 SELPP16109 830 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 CD34P28906 385 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 CASRP41180 1078 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 HAAOP46952 286 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 PLAURQ03405 335 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 Q499Y3 187 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 DCST2Q5T1A1 773 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 FAM109BQ6ICB4 259 aaPredicted RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 UQCC3Q6UW78 93 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 GTPBP8Q8N3Z3 284 aaPredicted RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 ZSCAN1Q8NBB4 408 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 TMIEQ8NEW7 156 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 OR2L5Q8NG80 312 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ZNF514Q96K75 400 aaPredicted RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 CHRNA9Q9UGM1 479 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 TINAGQ9UJW2 476 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 WNT6Q9Y6F9 365 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 GXYLT2A0PJZ3 443 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 SSX5O60225 188 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 HLA-AP01891 365 aaKnown RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 NID1P14543 1247 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 EPCAMP16422 314 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 SPI1P17947 270 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 PRSS3P35030 304 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 CCR2P41597 374 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 DHRS2Q13268 280 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ARHGAP19Q14CB8 494 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 NKPD1Q17RQ9 610 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 TMEM35AQ53FP2 167 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ETV3LQ6ZN32 361 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 RHOUQ7L0Q8 258 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ZNF227Q86WZ6 799 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 TCEAL8Q8IYN2 117 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 GABRG1Q8N1C3 465 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ZNF619Q8N2I2 560 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 OR4K14Q8NGD5 310 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 OR10R2Q8NGX6 335 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 LMF1Q96S06 567 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 PCBD2Q9H0N5 130 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 GPR34Q9UPC5 381 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 CACNA1IQ9P0X4 2223 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 A0A1B0GWA3 101 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 FGF18O76093 207 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 PMS2P2O95744 297 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 IFNA4P05014 189 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 POU3F4P49335 361 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 DIO1P49895 249 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS52-212ENST00000445902 FAM122BQ7Z309 247 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 SLC35F3Q8IY50 421 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
VPS52-212ENST00000445902 COX18Q8N8Q8 333 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 OR5M8Q8NGP6 311 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ZCCHC10Q8TBK6 192 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 TMEM106AQ96A25 262 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ARRDC3Q96B67 414 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 MYADMQ96S97 322 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ATG5Q9H1Y0 275 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 SFXN1Q9H9B4 322 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 TMEM27Q9HBJ8 222 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 FRRS1LQ9P0K9 344 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 ETV7Q9Y603 341 aa12.72□□□□□ -0.37
VPS52-212ENST00000445902 RAB19A4D1S5 217 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 OR52A4PA6NMU1 304 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 OR2F2O95006 317 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 SNAPINO95295 136 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 RAB3DO95716 219 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 S100A9P06702 114 aaKnown RBP12.71□□□□□ -0.37
VPS52-212ENST00000445902 AQP2P41181 271 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 PSMD4P55036 377 aaKnown RBP12.71□□□□□ -0.37
VPS52-212ENST00000445902 OR2F1Q13607 317 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms