RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ZNF726A6NNF4 738 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 SERPINI2O75830 405 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 ZNF14P17017 642 aaPredicted RBP13.31□□□□□ -0.28
SEC13-213ENST00000445064 GPX2P18283 190 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 TCN1P20061 433 aaPredicted RBP13.31□□□□□ -0.28
SEC13-213ENST00000445064 PPIBP23284 216 aaKnown RBP13.31□□□□□ -0.28
SEC13-213ENST00000445064 AHCYP23526 432 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 SLC6A2P23975 617 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 CDH12P55289 794 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 RAB1AP62820 205 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 RIN1Q13671 783 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 OR6N1Q8NGY5 312 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 MRPL24Q96A35 216 aaKnown RBP13.31□□□□□ -0.28
SEC13-213ENST00000445064 ULBP2Q9BZM5 246 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 TMEM38AQ9H6F2 299 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 SLCO1B3Q9NPD5 702 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 B3GAT2Q9NPZ5 323 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 MRPL39Q9NYK5 338 aaKnown RBP13.31□□□□□ -0.28
SEC13-213ENST00000445064 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.31□□□□□ -0.28
SEC13-213ENST00000445064 TMEFF2Q9UIK5 374 aaPredicted RBP13.31□□□□□ -0.28
SEC13-213ENST00000445064 SLC13A4Q9UKG4 626 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 NOX1Q9Y5S8 564 aa13.31□□□□□ -0.28
SEC13-213ENST00000445064 STAB1Q9NY15 2570 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 TRBV5-3A0A0A0MS03 114 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 EVPLLA8MZ36 301 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 C11orf98E9PRG8 122 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 PLPP3O14495 311 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 SERPINB7O75635 380 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 MFN2O95140 757 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 TGDSO95455 350 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 ZNF35P13682 527 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 B4GALT1P15291 398 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 PTDSS1P48651 473 aaKnown RBP13.3□□□□□ -0.28
SEC13-213ENST00000445064 SEC24CP53992 1094 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 PUDPQ08623 228 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 TRMT5Q32P41 509 aaKnown RBP13.3□□□□□ -0.28
SEC13-213ENST00000445064 AGKQ53H12 422 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 PXKQ7Z7A4 578 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 LRP11Q86VZ4 500 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 ARMC8Q8IUR7 673 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 SCAIQ8N9R8 606 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 LINC01356Q8N9X3 169 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 SMYD1Q8NB12 490 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 HPS1Q92902 700 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 C7orf26Q96N11 449 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 FOXB1Q99853 325 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 SYT3Q9BQG1 590 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 ZNF224Q9NZL3 707 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 REV1Q9UBZ9 1251 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 SPEF1Q9Y4P9 236 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 GMEB1Q9Y692 573 aa13.3□□□□□ -0.28
SEC13-213ENST00000445064 SYNGR3O43761 229 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 PATE4P0C8F1 98 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 ADORA3P0DMS8 318 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 COL8A2P25067 703 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 GLRXP35754 106 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 GIPRP48546 466 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 EVX1P49640 407 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 CDH15P55291 814 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 BIDP55957 195 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 CCNIQ14094 377 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 LIPNQ5VXI9 398 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 ZNF627Q7L945 461 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 RANBP3LQ86VV4 465 aaPredicted RBP13.29□□□□□ -0.28
SEC13-213ENST00000445064 HIPK4Q8NE63 616 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 BHLHE22Q8NFJ8 381 aaPredicted RBP13.29□□□□□ -0.28
SEC13-213ENST00000445064 FGFBP3Q8TAT2 258 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 C1orf159Q96HA4 380 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 MCHR1Q99705 422 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 TMEM43Q9BTV4 400 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 CCDC28BQ9BUN5 200 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 MS4A5Q9H3V2 200 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 FZR1Q9UM11 496 aa13.29□□□□□ -0.28
SEC13-213ENST00000445064 M0R233 179 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 M0R3H8 397 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 HPXP02790 462 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 OPN1SWP03999 348 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 SRP14P37108 136 aaKnown RBP13.28□□□□□ -0.28
SEC13-213ENST00000445064 ALDH3B1P43353 468 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 CSNK1A1P48729 337 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 RAB39AQ14964 217 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 MAD2L1BPQ15013 274 aaPredicted RBP13.28□□□□□ -0.28
SEC13-213ENST00000445064 DUSP7Q16829 419 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 RUNDC3AQ59EK9 446 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 ELFN2Q5R3F8 820 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 BEND6Q5SZJ8 279 aaPredicted RBP13.28□□□□□ -0.28
SEC13-213ENST00000445064 GKAP1Q5VSY0 366 aaPredicted RBP13.28□□□□□ -0.28
SEC13-213ENST00000445064 DLEU7Q6UYE1 221 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 LINC00114Q6XXX2 140 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 WDR88Q6ZMY6 472 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 CARM1Q86X55 608 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 SNX32Q86XE0 403 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 SKA3Q8IX90 412 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 OR5J2Q8NH18 312 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 LRRC8CQ8TDW0 803 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 MYEF2Q9P2K5 600 aaKnown RBP13.28□□□□□ -0.28
SEC13-213ENST00000445064 CORO2BQ9UQ03 480 aa13.28□□□□□ -0.28
SEC13-213ENST00000445064 CPSF4LA6NMK7 179 aaKnown RBP13.27□□□□□ -0.29
SEC13-213ENST00000445064 M0QX08 132 aa13.27□□□□□ -0.29
SEC13-213ENST00000445064 OR6A2O95222 327 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms