RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ELMOD3Q96FG2 381 aa11.79□□□□□ -0.52
LINC00642-202ENST00000442515 OXGR1Q96P68 337 aa11.79□□□□□ -0.52
LINC00642-202ENST00000442515 TRNT1Q96Q11 434 aaKnown RBP11.79□□□□□ -0.52
LINC00642-202ENST00000442515 MRI1Q9BV20 369 aa11.79□□□□□ -0.52
LINC00642-202ENST00000442515 GATA5Q9BWX5 397 aaPredicted RBP11.79□□□□□ -0.52
LINC00642-202ENST00000442515 OR51B6Q9H340 312 aa11.79□□□□□ -0.52
LINC00642-202ENST00000442515 DENND2DQ9H6A0 471 aaPredicted RBP11.79□□□□□ -0.52
LINC00642-202ENST00000442515 FBXL3Q9UKT7 428 aa11.79□□□□□ -0.52
LINC00642-202ENST00000442515 INSIG2Q9Y5U4 225 aa11.79□□□□□ -0.52
LINC00642-202ENST00000442515 ARHGAP32A7KAX9 2087 aa11.79□□□□□ -0.52
LINC00642-202ENST00000442515 A0A096LPI6 279 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 SLC22A31A6NKX4 558 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 PIN1P1O15428 100 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 HOXA3O43365 443 aaPredicted RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 UBL3O95164 117 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 C1QCP02747 245 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 ABHD2P08910 425 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 G6PDP11413 515 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 UQCRC2P22695 453 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 ACAA2P42765 397 aaKnown RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 RPS5P46782 204 aaKnown RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 COPZ1P61923 177 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 RELBQ01201 579 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 GLO1Q04760 184 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 C6orf136Q5SQH8 315 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 ATG16L1Q676U5 607 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 Q6ZPA2 131 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 ZNF572Q7Z3I7 529 aaPredicted RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 ANKRD46Q86W74 232 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 C10orf107Q8IVU9 208 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 C20orf196Q8IYI0 205 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 ZNF440Q8IYI8 595 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 PARP8Q8N3A8 854 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 PAQR4Q8N4S7 273 aaPredicted RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 STK35Q8TDR2 534 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 NEURL3Q96EH8 262 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 KTI12Q96EK9 354 aaPredicted RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 C3orf30Q96M34 536 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 DPY30Q9C005 99 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 PSMC3IPQ9P2W1 217 aaPredicted RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 MARCOQ9UEW3 520 aaPredicted RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 POFUT2Q9Y2G5 429 aa11.78□□□□□ -0.52
LINC00642-202ENST00000442515 NUP214P35658 2090 aaPredicted RBP11.78□□□□□ -0.52
LINC00642-202ENST00000442515 A0A1W2PPM1 405 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 CLPSL1A2RUU4 121 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 CDHR4A6H8M9 788 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 M0R082 166 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 FZD7O75084 574 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 NGFP01138 241 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 SERPINA5P05154 406 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 DBIP07108 87 aaKnown RBP11.77□□□□□ -0.53
LINC00642-202ENST00000442515 FGF4P08620 206 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 PATE4P0C8F1 98 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 OR8G3PP0DMU2 310 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 EGR4Q05215 589 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 RBBP4Q09028 425 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 CAMK2DQ13557 499 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 LRRC74BQ6ZQY2 392 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 BHLHE22Q8NFJ8 381 aaPredicted RBP11.77□□□□□ -0.53
LINC00642-202ENST00000442515 FGFBP3Q8TAT2 258 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 ZNF417Q8TAU3 575 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 AGR3Q8TD06 166 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 IFT81Q8WYA0 676 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 ZNF587Q96SQ5 575 aaPredicted RBP11.77□□□□□ -0.53
LINC00642-202ENST00000442515 FOXB1Q99853 325 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 RSPO3Q9BXY4 272 aaPredicted RBP11.77□□□□□ -0.53
LINC00642-202ENST00000442515 NPHS2Q9NP85 383 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 C1RLQ9NZP8 487 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 TBK1Q9UHD2 729 aa11.77□□□□□ -0.53
LINC00642-202ENST00000442515 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.53
LINC00642-202ENST00000442515 DNAH9Q9NYC9 4486 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 AIM2O14862 343 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 UBOX5O94941 541 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 NDUFA7O95182 113 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 CPSF4O95639 269 aaKnown RBP11.76□□□□□ -0.53
LINC00642-202ENST00000442515 MT-ND5P03915 603 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 LCKP06239 509 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 CCL2P13500 99 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 PRG2P13727 222 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 SELEP16581 610 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 CHI3L1P36222 383 aaPredicted RBP11.76□□□□□ -0.53
LINC00642-202ENST00000442515 CLDN8P56748 225 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 SEC61A1P61619 476 aaKnown RBP11.76□□□□□ -0.53
LINC00642-202ENST00000442515 CKAP4Q07065 602 aaKnown RBP11.76□□□□□ -0.53
LINC00642-202ENST00000442515 SLC3A1Q07837 685 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
LINC00642-202ENST00000442515 TAF9Q16594 264 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 FAM209AQ5JX71 171 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 ZNF836Q6ZNA1 936 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 RNF130Q86XS8 419 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 MNS1Q8NEH6 495 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 SLC30A7Q8NEW0 376 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 OR8J2Q8NGG1 315 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 OR52E2Q8NGJ4 325 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 ZNF519Q8TB69 540 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 SLC35A5Q9BS91 424 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 MECRQ9BV79 373 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 EMC6Q9BV81 110 aa11.76□□□□□ -0.53
LINC00642-202ENST00000442515 ULBP2Q9BZM5 246 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms