RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 BGLAPP02818 100 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CD14P08571 375 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TSPAN19P0C672 248 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ASAH2BP0C7U1 165 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PRKCAP17252 672 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GADD45AP24522 165 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 APOBEC1P41238 236 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RGS6P49758 472 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ETV1P50549 477 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 WNT4P56705 351 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LSM3P62310 102 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ERVK-25P63136 954 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 EGR4Q05215 589 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 POU4F2Q12837 409 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MLLT11Q13015 90 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FHL1Q13642 323 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TOMM20Q15388 145 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CTF1Q16619 201 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 C1orf140Q5VVS0 124 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TRILQ7L0X0 811 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 YRDCQ86U90 279 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PLCZ1Q86YW0 608 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GHDCQ8N2G8 530 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KBTBD8Q8NFY9 601 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MOSPD2Q8NHP6 518 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PRR7Q8TB68 274 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZFAND2BQ8WV99 257 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TAAR8Q969N4 342 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 NRIP3Q9NQ35 241 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SPRR3Q9UBC9 169 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 B4GALT7Q9UBV7 327 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SH3BGRL2Q9UJC5 107 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LSM2Q9Y333 95 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SPIN1Q9Y657 262 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TEX13CA0A0J9YWL9 993 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CCDC182A6NF36 153 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TRIM64BA6NI03 449 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 IMPA2O14732 288 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR2T1O43869 369 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SERPINI2O75830 405 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR6A2O95222 327 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SCG5P05408 212 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 APEHP13798 732 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 HIST1H1CP16403 213 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SERPINB10P48595 397 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CTXN1P60606 82 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RPL18Q07020 188 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FOXF1Q12946 379 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 AQP6Q13520 282 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC10A1Q14973 349 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SPCS2Q15005 226 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KRTCAP3Q53RY4 240 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FAM69AQ5T7M9 428 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 C1QL3Q5VWW1 255 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CYB561A3Q8NBI2 242 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR2M3Q8NG83 312 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR4F15Q8NGB8 312 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR6S1Q8NH40 331 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZNF524Q96C55 264 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC25A36Q96CQ1 311 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OPALINQ96PE5 141 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PTGES2Q9H7Z7 377 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 INPP5EQ9NRR6 644 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SERINC1Q9NRX5 453 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PLSCR2Q9NRY7 297 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 VDAC3Q9Y277 283 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ADAM18Q9Y3Q7 739 aa13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SPTAN1Q13813 2472 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TRGV5A0A0B4J1U4 118 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LOC100506127A0A0U1RQW1 187 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC19A2O60779 497 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RENP00797 406 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 IGHG3P01860 377 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 IGHA1P01876 353 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TFPIP10646 304 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 UQCRC1P31930 480 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DLX5P56178 289 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 VBP1P61758 197 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 NCS1P62166 190 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ACTC1P68032 377 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ACTA1P68133 377 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ROR2Q01974 943 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SRSF1Q07955 248 aaKnown RBP eCLIP13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DYNC1I2Q13409 638 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KRR1Q13601 381 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MFSD13AQ14CX5 517 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 C3AR1Q16581 482 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 WIPI1Q5MNZ9 446 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GPR139Q6DWJ6 353 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LEG1Q6P5S2 330 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PAQR6Q6TCH4 344 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TMPRSS11AQ6ZMR5 421 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ADCK1Q86TW2 530 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms