RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 LINC00114Q6XXX2 140 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 MDP1Q86V88 176 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 PCYOX1LQ8NBM8 494 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF540Q8NDQ6 660 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 GPR32P1Q8NGA4 272 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 OR8J3Q8NGG0 315 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 TXNDC15Q96J42 360 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 DENND2DQ9H6A0 471 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-204ENST00000439619 NANOGQ9H9S0 305 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 SLC7A7Q9UM01 511 aa16.33■□□□□ 0.2
CCDC78-204ENST00000439619 LRRN3E7EW58 273 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 C11orf98E9PRG8 122 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 RNF13O43567 381 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 SEC14L2O76054 403 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 RAB36O95755 333 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 CH25HO95992 272 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 IFNGR1P15260 489 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 CALCRP30988 508 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 PPOXP50336 477 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 BIDP55957 195 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 VLDLRP98155 873 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 DAG1Q14118 895 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 CARTPTQ16568 116 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF74Q16587 644 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 CHRFAM7AQ494W8 412 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 CCDC80Q76M96 950 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 LRRC58Q96CX6 371 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF837Q96EG3 531 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-204ENST00000439619 FOXB1Q99853 325 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 PCDHAC1Q9H158 963 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 PLK3Q9H4B4 646 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 GID8Q9NWU2 228 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF229Q9UJW7 825 aa16.32■□□□□ 0.2
CCDC78-204ENST00000439619 IGHV2OR16-5A0A0B4J2B6 119 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 LOC390937A0A1W2PQ73 354 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 KPNA4O00629 521 aaPredicted RBP16.31■□□□□ 0.2
CCDC78-204ENST00000439619 MRASO14807 208 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 GPRIN2O60269 458 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 UBL3O95164 117 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 CELA3BP08861 270 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 NPTX1Q15818 432 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 PHYHD1Q5SRE7 291 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 CYB5R2Q6BCY4 276 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 SLC35D2Q76EJ3 337 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF627Q7L945 461 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 NANOGNBQ7Z5D8 188 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 HIPK1Q86Z02 1210 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 OR6X1Q8NH79 312 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 ZNF566Q969W8 418 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 SORCS2Q96PQ0 1159 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 POLR2J2Q9GZM3 115 aaKnown RBP16.31■□□□□ 0.2
CCDC78-204ENST00000439619 POLR2J3Q9H1A7 115 aaKnown RBP16.31■□□□□ 0.2
CCDC78-204ENST00000439619 DYNLRB1Q9NP97 96 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 SH3GLB1Q9Y371 365 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 TLN2Q9Y4G6 2542 aa16.31■□□□□ 0.2
CCDC78-204ENST00000439619 CSPG4Q6UVK1 2322 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 KIAA1324LA8MWY0 1029 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-204ENST00000439619 hCG_2039718K7EN88 272 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 FBP2O00757 339 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 HLA-HP01893 362 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 B4GALT1P15291 398 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 IFNA8P32881 189 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 THBS4P35443 961 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 GZMKP49863 264 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 TAS2R41P59536 307 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 LSM11P83369 360 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC78-204ENST00000439619 GALK2Q01415 458 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 PIGFQ07326 219 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 ZP4Q12836 540 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 SNTB2Q13425 540 aaKnown RBP16.3■□□□□ 0.2
CCDC78-204ENST00000439619 C6orf52Q5T4I8 152 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 PODNL1Q6PEZ8 512 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 PIWIL3Q7Z3Z3 882 aaKnown RBP16.3■□□□□ 0.2
CCDC78-204ENST00000439619 HDDC2Q7Z4H3 204 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 RBM45Q8IUH3 476 aaKnown RBP16.3■□□□□ 0.2
CCDC78-204ENST00000439619 NEU4Q8WWR8 484 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-204ENST00000439619 SLC25A44Q96H78 314 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-204ENST00000439619 KCNK17Q96T54 332 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 CDC42EP3Q9UKI2 254 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 CMAHPQ9Y471 501 aa16.3■□□□□ 0.2
CCDC78-204ENST00000439619 A0A096LNT2 108 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 SASH3O75995 380 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 LY6HO94772 140 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 FARS2O95363 451 aaKnown RBP16.29■□□□□ 0.2
CCDC78-204ENST00000439619 BCL10O95999 233 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 RBM34P42696 430 aaKnown RBP16.29■□□□□ 0.2
CCDC78-204ENST00000439619 PTDSS1P48651 473 aaKnown RBP16.29■□□□□ 0.2
CCDC78-204ENST00000439619 RPS23P62266 143 aaKnown RBP16.29■□□□□ 0.2
CCDC78-204ENST00000439619 RAB1AP62820 205 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 HGFACQ04756 655 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 KLF10Q13118 480 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 GGTLC2Q14390 218 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 IQCCQ4KMZ1 466 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 RABL3Q5HYI8 236 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 GKAP1Q5VSY0 366 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-204ENST00000439619 KRT80Q6KB66 452 aa16.29■□□□□ 0.2
CCDC78-204ENST00000439619 DPPA2Q7Z7J5 298 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms