RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 GPR35Q9HC97 309 aa17.12■□□□□ 0.33
SEMA3B-206ENST00000439487 RASSF1Q9NS23 344 aa17.12■□□□□ 0.33
SEMA3B-206ENST00000439487 AURKCQ9UQB9 309 aa17.12■□□□□ 0.33
SEMA3B-206ENST00000439487 TMEM5Q9Y2B1 443 aa17.12■□□□□ 0.33
SEMA3B-206ENST00000439487 LRBAP50851 2863 aa17.12■□□□□ 0.33
SEMA3B-206ENST00000439487 A0A1W2PRG6 482 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 DHRS12A0PJE2 317 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 CLOCKO15516 846 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 BCL10O95999 233 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 RAP2AP10114 183 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 SLC9A3P48764 834 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 RPS4XP62701 263 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 ALG10Q5BKT4 473 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 FBXW10Q5XX13 1052 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 HMBOX1Q6NT76 420 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 IGFN1Q86VF2 1251 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 OR6X1Q8NH79 312 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 ADAD1Q96M93 576 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 MUS81Q96NY9 551 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 USB1Q9BQ65 265 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 TMCC3Q9ULS5 477 aa17.11■□□□□ 0.33
SEMA3B-206ENST00000439487 A0A1W2PR80 420 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 OR5H1A6NKK0 313 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 DEFB108AA8MXU0 73 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 TNFRSF11BO00300 401 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 EBAG9O00559 213 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 KLF4O43474 513 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 HRGP04196 525 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 LIMS1P48059 325 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 TGFBR3Q03167 851 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 PPP1R8Q12972 351 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 ACKR1Q16570 336 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 TIMM23BQ5SRD1 257 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 OR7E24Q6IFN5 339 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 LRRC75AQ8NAA5 344 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 OR6N1Q8NGY5 312 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 OR52N5Q8NH56 324 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 ZNF837Q96EG3 531 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 PIK3IP1Q96FE7 263 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 LRR1Q96L50 414 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 GPA33Q99795 319 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 CHID1Q9BWS9 393 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 POLDIP3Q9BY77 421 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 CRLF2Q9HC73 371 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 KRCC1Q9NPI7 259 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 LYVE1Q9Y5Y7 322 aa17.1■□□□□ 0.33
SEMA3B-206ENST00000439487 TCRBV3S1A0A5B6 114 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 MCIDASD6RGH6 385 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 RPL36A-HNRNPH2H7BZ11 118 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 OR10H3O60404 316 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 KRT36O76013 467 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 CSNK1A1P48729 337 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 HMGA2P52926 109 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 CTXN1P60606 82 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 RUNX1T1Q06455 604 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 PPA1Q15181 289 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 CEACAM16Q2WEN9 425 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 ANKDD1AQ495B1 522 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 ZBED5Q49AG3 693 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 OR2T5Q6IEZ7 315 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 ASRGL1Q7L266 308 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 ZER1Q7Z7L7 766 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 P2RY8Q86VZ1 359 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 WDR31Q8NA23 367 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 C1orf162Q8NEQ5 155 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 OR1K1Q8NGR3 316 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 OR2T29Q8NH02 315 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 ASB10Q8WXI3 467 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 TMEM54Q969K7 222 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 MUCL1Q96DR8 90 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 SLC25A44Q96H78 314 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 CLEC4MQ9H2X3 399 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 MMADHCQ9H3L0 296 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 B3GAT2Q9NPZ5 323 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 SLC17A5Q9NRA2 495 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 VNN3Q9NY84 501 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 PLCE1Q9P212 2302 aa17.09■□□□□ 0.33
SEMA3B-206ENST00000439487 DSCAMO60469 2012 aa17.08■□□□□ 0.33
SEMA3B-206ENST00000439487 UNC119BA6NIH7 251 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 PTP4A3O75365 173 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 GOSR1O95249 250 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 ZNF26P17031 533 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 DAP3P51398 398 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 ARF1P84077 181 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 TOP3AQ13472 1001 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 HIKESHIQ53FT3 197 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 SEZ6L2Q6UXD5 910 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 OR4C15Q8NGM1 316 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 ZNF566Q969W8 418 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 RSRC1Q96IZ7 334 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 LURAP1Q96LR2 239 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 TXNIPQ9H3M7 391 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 GLTPQ9NZD2 209 aa17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 ZNF346Q9UL40 294 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-206ENST00000439487 A0A096LPE4 126 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 A0A1W2PPZ6 126 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 TRMUO75648 421 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 LOXP28300 417 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms