RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 GFRA3O60609 400 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 PPP1R3DO95685 299 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 SEMA4FO95754 770 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ZNF806P0C7X5 589 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ADRB3P13945 408 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 FAUP35544 74 aaKnown RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 PSMB10P40306 273 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ACTA2P62736 377 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ACTG2P63267 376 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 NDUFAF6Q330K2 333 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 TCEAL6Q6IPX3 200 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 RNF113BQ8IZP6 322 aaKnown RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 SYS1Q8N2H4 156 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 OR9A2Q8NGT5 310 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 OR2L2Q8NH16 312 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 STK35Q8TDR2 534 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ADAMTS15Q8TE58 950 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 PHYHIPQ92561 330 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 TCEAL3Q969E4 200 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 SLC25A28Q96A46 364 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ZMYND19Q96E35 227 aaPredicted RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 LRIG1Q96JA1 1093 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ACTRT3Q9BYD9 372 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 CAPN10Q9HC96 672 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 FSCN3Q9NQT6 498 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 SIGLEC7Q9Y286 467 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 COL5A1P20908 1838 aaPredicted RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 TRAV27A0A087WT01 109 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 C17orf113A0A1B0GUU1 675 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 LRIT2A6NDA9 550 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 PRNPP04156 253 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 CD1AP06126 327 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 GP1BAP07359 652 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ILF3Q12906 894 aaKnown RBP eCLIP7.82□□□□□ -1.16
HPS4-206ENST00000439453 SERTAD2Q14140 314 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ERN2Q76MJ5 926 aaKnown RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 RANBP3LQ86VV4 465 aaPredicted RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 LDLRAD3Q86YD5 345 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 OR4C16Q8NGL9 310 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 SNX33Q8WV41 574 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 TFGQ92734 400 aaPredicted RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 FAM122AQ96E09 287 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 DTD2Q96FN9 168 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 C10orf90Q96M02 699 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 MTHFD2LQ9H903 347 aaPredicted RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 MOKQ9UQ07 419 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 CLEC3AO75596 197 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 AIFM1O95831 613 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 ERGP11308 486 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 PVALBP20472 110 aaPredicted RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 HTR2AP28223 471 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 NDUFS1P28331 727 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 RORAP35398 523 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 MPLP40238 635 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 PCGF3Q3KNV8 242 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 AKIRIN2Q53H80 203 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 KIAA0895LQ68EN5 471 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 GLB1L2Q8IW92 636 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CCDC36Q8IYA8 594 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CDK20Q8IZL9 346 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 PUSL1Q8N0Z8 303 aaKnown RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 OR51A7Q8NH64 312 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 C15orf40Q8WUR7 153 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 BPIFA2Q96DR5 249 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 LINC00615Q96LM1 132 aaPredicted RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 PITHD1Q9GZP4 211 aaPredicted RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 PCED1AQ9H1Q7 454 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 PLEKHM1Q9Y4G2 1056 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 TRAV14DV4A0A0A6YYC5 116 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 A0A0D9SG52 128 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 OR2T7P0C7T2 308 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 GKN3PP0CG01 181 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CALCBP10092 127 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 MNDAP41218 407 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 NAA10P41227 235 aaPredicted RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 MAGEB1P43366 347 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CSNK1G2P78368 415 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 IGSF11Q5DX21 431 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 ZNF546Q86UE3 836 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 BOLLQ8N9W6 283 aaKnown RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 OR2T27Q8NH04 317 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CDS1Q92903 461 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 MIB2Q96AX9 1013 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 MACROD1Q9BQ69 325 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 PCBD2Q9H0N5 130 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 PIGMQ9H3S5 423 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 GPR27Q9NS67 375 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 WDR45Q9Y484 360 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 FAM186AA6NE01 2351 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 ZFHX4Q86UP3 3567 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CENPVL1A0A0U1RR11 272 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 A0A1W2PPV9 198 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 A0A1W2PR77 199 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 C4orf51C9J302 202 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 C1QTNF3-AMACRE9PGA6 284 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CTNSO60931 367 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 RBBP9O75884 186 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 GLSO94925 669 aaPredicted RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 LYPD3O95274 346 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms