RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 PAICSP22234 425 aaKnown RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 ACVR2AP27037 513 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 BIDP55957 195 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 RNPS1Q15287 305 aaKnown RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 SF3B4Q15427 424 aaKnown RBP eCLIP23.55■■□□□ 1.366e-9■■■■■ 27.6
TMEM248-205ENST00000433271 C6orf141Q5SZD1 244 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 MEDAGQ5VYS4 303 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 GTF2IRD2BQ6EKJ0 949 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 LAIR2Q6ISS4 152 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 UGT2A3Q6UWM9 527 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 PLXDC2Q6UX71 529 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 GTF2IRD2Q86UP8 949 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 CPOQ8IVL8 374 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 ZIC4Q8N9L1 334 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 OR6X1Q8NH79 312 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 ADAD1Q96M93 576 aaKnown RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 HINT3Q9NQE9 182 aaKnown RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 CLCF1Q9UBD9 225 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 ING1Q9UK53 422 aaPredicted RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 FLVCR1Q9Y5Y0 555 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 GTF3C1Q12789 2109 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 PRR23D1E9PI22 279 aaPredicted RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 PRR23D2P0DMB1 279 aaPredicted RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 FCGR2AP12318 317 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 PLBD1Q6P4A8 553 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 LEG1Q6P5S2 330 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 CXXC5Q7LFL8 322 aaKnown RBP23.55■■□□□ 1.36
TMEM248-205ENST00000433271 CYB561A3Q8NBI2 242 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 PTP4A1Q93096 173 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 SNX18Q96RF0 628 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 EMC6Q9BV81 110 aa23.55■■□□□ 1.36
TMEM248-205ENST00000433271 PRSS37A4D1T9 235 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 SLC35F4A4IF30 521 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 FAM183AA6NL82 134 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 GPR171O14626 319 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 TGM6O95932 706 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 CLDN17P56750 224 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 RUNX1T1Q06455 604 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 AADACL4Q5VUY2 407 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 ZNF585AQ6P3V2 769 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 GFRALQ6UXV0 394 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 SLC25A44Q96H78 314 aaPredicted RBP23.54■■□□□ 1.36
TMEM248-205ENST00000433271 ZNF385AQ96PM9 386 aaKnown RBP23.54■■□□□ 1.36
TMEM248-205ENST00000433271 RNF122Q9H9V4 155 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 DNAJC27Q9NZQ0 273 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 CACNA1BQ00975 2339 aa23.54■■□□□ 1.36
TMEM248-205ENST00000433271 SH3D21A4FU49 640 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 OR6C68A6NDL8 312 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 ZNF726A6NNF4 738 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 ENTPD6O75354 484 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 GABRA1P14867 456 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 PTGER4P35408 488 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 CXCR4P61073 352 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 ACSF3Q4G176 576 aaPredicted RBP23.53■■□□□ 1.36
TMEM248-205ENST00000433271 NXNL2Q5VZ03 156 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 BCDIN3DQ7Z5W3 292 aaKnown RBP23.53■■□□□ 1.36
TMEM248-205ENST00000433271 WDFY1Q8IWB7 410 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 ZNF786Q8N393 782 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 FAM57AQ8TBR7 257 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 HDAC2Q92769 488 aaKnown RBP23.53■■□□□ 1.36
TMEM248-205ENST00000433271 OTULINQ96BN8 352 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 ZNF582Q96NG8 517 aaPredicted RBP23.53■■□□□ 1.36
TMEM248-205ENST00000433271 NR1H4Q96RI1 486 aaPredicted RBP23.53■■□□□ 1.36
TMEM248-205ENST00000433271 TRIB1Q96RU8 372 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 CALHM2Q9HA72 323 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 BCO1Q9HAY6 547 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 EMC3Q9P0I2 261 aa23.53■■□□□ 1.36
TMEM248-205ENST00000433271 SPENQ96T58 3664 aaKnown RBP23.53■■□□□ 1.36
TMEM248-205ENST00000433271 KDM4EB2RXH2 506 aaPredicted RBP23.52■■□□□ 1.36
TMEM248-205ENST00000433271 M0R3G1 203 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 AHCYL1O43865 530 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 WDR1O75083 606 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 RENP00797 406 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 TPOP07202 933 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 EDN3P14138 238 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 ABOP16442 354 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 FMO3P31513 532 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 KCNK17Q96T54 332 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 MRPL13Q9BYD1 178 aaKnown RBP23.52■■□□□ 1.36
TMEM248-205ENST00000433271 GP6Q9HCN6 339 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 VSX1Q9NZR4 365 aaPredicted RBP23.52■■□□□ 1.36
TMEM248-205ENST00000433271 EPG5Q9HCE0 2579 aa23.52■■□□□ 1.36
TMEM248-205ENST00000433271 FIGNL2A6NMB9 653 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 ZNF724A8MTY0 619 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 AKAP8O43823 692 aaKnown RBP23.51■■□□□ 1.35
TMEM248-205ENST00000433271 TRMUO75648 421 aaKnown RBP23.51■■□□□ 1.35
TMEM248-205ENST00000433271 CHN2P52757 468 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 SLC25A1P53007 311 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 CSNK2BP67870 215 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 SMN1Q16637 294 aaKnown RBP23.51■■□□□ 1.35
TMEM248-205ENST00000433271 P4HA3Q7Z4N8 544 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 MCEMP1Q8IX19 187 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 WNT2BQ93097 391 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 RFKQ969G6 155 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 ZNF775Q96BV0 537 aaPredicted RBP23.51■■□□□ 1.35
TMEM248-205ENST00000433271 HCAR1Q9BXC0 346 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 YTHDF1Q9BYJ9 559 aaKnown RBP23.51■■□□□ 1.35
TMEM248-205ENST00000433271 NMNAT2Q9BZQ4 307 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 MED20Q9H944 212 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 H2AFY2Q9P0M6 372 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms