RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 TFAP2CQ92754 450 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 DVL3Q92997 716 aaPredicted RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 HRASLS5Q96KN8 279 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 CSAG2Q9Y5P2 127 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 ARPC3O15145 178 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 NKX2-1P43699 371 aaPredicted RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 CEACAM7Q14002 265 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 WBP2NLQ6ICG8 309 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 ZNF813Q6ZN06 617 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 SLC16A14Q7RTX9 510 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 ARRDC3Q96B67 414 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 NKX2-4Q9H2Z4 354 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 RPS19P39019 145 aaKnown RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 VEZF1Q14119 521 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 DEFB115Q30KQ5 88 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 NXF2Q9GZY0 626 aaKnown RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 ACSS1Q9NUB1 689 aaPredicted RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 CAMK2AQ9UQM7 478 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 ZNF638Q14966 1978 aaKnown RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 TRAV27A0A087WT01 109 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 CASP7P55210 303 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 SLC25A32Q9H2D1 315 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 P4HTMQ9NXG6 502 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 OR2F2O95006 317 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 PMCHP20382 165 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 OR2F1Q13607 317 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 RABEPKQ7Z6M1 372 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 MMP21Q8N119 569 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 SLC22A24Q8N4F4 322 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 MRPS28Q9Y2Q9 187 aaKnown RBP15.31■□□□□ 0.04
RIF1-204ENST00000430328 SPATA31A1Q5TZJ5 1347 aa15.31■□□□□ 0.04
RIF1-204ENST00000430328 FAM183AA6NL82 134 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 RNASET2O00584 256 aaKnown RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 LGI1O95970 557 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 OR5G3P0C626 314 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 IL1RNP18510 177 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 INPP5JQ15735 1006 aaPredicted RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 PRR27Q6MZM9 219 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 CPEB2Q7Z5Q1 589 aaKnown RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 CDC20BQ86Y33 519 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 TMEM123Q8N131 208 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 SCCPDHQ8NBX0 429 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 CLTCL1P53675 1640 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 A0A1W2PPQ1 181 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 C17orf105B2RV13 164 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 LAMP1P11279 417 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 ADRA2CP18825 462 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 TACR1P25103 407 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 AGFG1P52594 562 aaKnown RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 ERHP84090 104 aaKnown RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 MARCH8Q5T0T0 291 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 TUSC5Q8IXB3 177 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 OR52B6Q8NGF0 335 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 RNF24Q9Y225 148 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 ALKQ9UM73 1620 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 OTOFQ9HC10 1997 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 OR5AL1P0C617 328 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 EID2Q8N6I1 236 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 SLC39A13Q96H72 371 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 MDC1Q14676 2089 aaKnown RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 SNRPBP14678 240 aaKnown RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 TMEM268Q5VZI3 342 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 DTWD2Q8NBA8 298 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 NME4O00746 187 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 CNMDO75829 334 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 FOLR3P41439 243 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 PPOXP50336 477 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 LCTLQ6UWM7 567 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 TMEM175Q9BSA9 504 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 GSX2Q9BZM3 304 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 APOBEC3BQ9UH17 382 aaKnown RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 NRP1O14786 923 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 EDDM3BP56851 147 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 SLC36A2Q495M3 483 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 OR51A2Q8NGJ7 313 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 EXTL1Q92935 676 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 TCTN2Q96GX1 697 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 MAF1Q9H063 256 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 CABIN1Q9Y6J0 2220 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 A0A0B4J203 849 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 A0A0D9SEW6 157 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 F2P00734 622 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 SPTBP11277 2137 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 MS4A2Q01362 244 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 GTDC1Q4AE62 458 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 FIGLAQ6QHK4 219 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 OR6K3Q8NGY3 331 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 RAB22AQ9UL26 194 aa15.3■□□□□ 0.04
RIF1-204ENST00000430328 TMEM184BQ9Y519 407 aaPredicted RBP15.3■□□□□ 0.04
RIF1-204ENST00000430328 M0R2Z0 102 aa15.29■□□□□ 0.04
RIF1-204ENST00000430328 SSSCA1O60232 199 aa15.29■□□□□ 0.04
RIF1-204ENST00000430328 GIPP09681 153 aaPredicted RBP15.29■□□□□ 0.04
RIF1-204ENST00000430328 ZNF888P0CJ79 500 aaPredicted RBP15.29■□□□□ 0.04
RIF1-204ENST00000430328 HHEXQ03014 270 aa15.29■□□□□ 0.04
RIF1-204ENST00000430328 ZNF85Q03923 595 aa15.29■□□□□ 0.04
RIF1-204ENST00000430328 MLF2Q15773 248 aaPredicted RBP15.29■□□□□ 0.04
RIF1-204ENST00000430328 BTNL3Q6UXE8 466 aa15.29■□□□□ 0.04
RIF1-204ENST00000430328 AMIGO3Q86WK7 504 aa15.29■□□□□ 0.04
RIF1-204ENST00000430328 ZNF547Q8IVP9 402 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms