RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PRSS50Q9UI38 385 aa13.2□□□□□ -0.3
GARNL3-204ENST00000429629 U3KQV3 271 aa13.2□□□□□ -0.3
GARNL3-204ENST00000429629 PCNX1Q96RV3 2341 aa13.2□□□□□ -0.3
GARNL3-204ENST00000429629 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
GARNL3-204ENST00000429629 SPTBN1Q01082 2364 aaKnown RBP13.19□□□□□ -0.3
GARNL3-204ENST00000429629 A6NIZ1 184 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 C11orf98E9PRG8 122 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 IMPA2O14732 288 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 ARPC3O15145 178 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 IDH3BO43837 385 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 E2F6O75461 281 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 TIPRLO75663 272 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 TXNDC12O95881 172 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 EDNRAP25101 427 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF133P52736 654 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-204ENST00000429629 SH3BGRP55822 239 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-204ENST00000429629 CTXN1P60606 82 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 RAP1BP61224 184 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 RPL27P61353 136 aaKnown RBP13.19□□□□□ -0.3
GARNL3-204ENST00000429629 RAP1AP62834 184 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 ACKR1Q16570 336 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 HIST3H3Q16695 136 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF627Q7L945 461 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-204ENST00000429629 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 UBE2J2Q8N2K1 259 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 OR10G2Q8NGC3 310 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 OR13C2Q8NGS9 318 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 FAM222BQ8WU58 562 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 TMEM54Q969K7 222 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 B3GAT2Q9NPZ5 323 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 KCNN3Q9UGI6 736 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 ADGRG4Q8IZF6 3080 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 KIAA1549Q9HCM3 1950 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 DOCK7Q96N67 2140 aa13.19□□□□□ -0.3
GARNL3-204ENST00000429629 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 TRAV27A0A087WT01 109 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 TUBAL3A6NHL2 446 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 C19orf84I3L1E1 186 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 IGHG1P01857 330 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 F13BP05160 661 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-204ENST00000429629 IGHV1-2P23083 117 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 GRNP28799 593 aaKnown RBP13.18□□□□□ -0.3
GARNL3-204ENST00000429629 BIDP55957 195 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF620Q6ZNG0 422 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 CXorf67Q86X51 503 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-204ENST00000429629 GPR137CQ8N3F9 429 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 SVOPLQ8N434 492 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 C17orf78Q8N4C9 275 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF433Q8N7K0 673 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-204ENST00000429629 ARIH2OSQ8N7S6 290 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 AQP11Q8NBQ7 271 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-204ENST00000429629 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 HSD17B8Q92506 261 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 KISS1RQ969F8 398 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF566Q969W8 418 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 FEVQ99581 238 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 ALG12Q9BV10 488 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 SMURF2Q9HAU4 748 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 MED29Q9NX70 200 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
GARNL3-204ENST00000429629 A1L4Q6 167 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF587BE7ETH6 402 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 H3BNX3 289 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ENTPD5O75356 428 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 KRT33AO76009 404 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 EPXP11678 715 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ACADSP16219 412 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 SLC6A6P31641 620 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 RPL4P36578 427 aaKnown RBP13.17□□□□□ -0.3
GARNL3-204ENST00000429629 KIR2DL3P43628 341 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ERFP50548 548 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 RPS6KA3P51812 740 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 FXYD6P3P58550 94 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 FAPQ12884 760 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 DAZAP2Q15038 168 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-204ENST00000429629 NRN1LQ496H8 165 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 TIMM23BQ5SRD1 257 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 FAM122BQ7Z309 247 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 TMEM179BQ7Z7N9 219 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 MEX3DQ86XN8 651 aaKnown RBP13.17□□□□□ -0.3
GARNL3-204ENST00000429629 MED12LQ86YW9 2145 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ZDHHC13Q8IUH4 622 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 CCDC36Q8IYA8 594 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 OR9Q2Q8NGE9 314 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF519Q8TB69 540 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 EMC6Q9BV81 110 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 OR52D1Q9H346 318 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF556Q9HAH1 456 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 S100A14Q9HCY8 104 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 OBP2BQ9NPH6 170 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 PDP1Q9P0J1 537 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-204ENST00000429629 GRHPRQ9UBQ7 328 aa13.17□□□□□ -0.3
GARNL3-204ENST00000429629 ZNF346Q9UL40 294 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms