RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 DANCRP0C864 163 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 IFI30P13284 250 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 CD99P14209 185 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 CDKN1AP38936 164 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 AQP2P41181 271 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 RBM34P42696 430 aaKnown RBP12.98□□□□□ -0.33
RTN4-210ENST00000427710 UBE2NP61088 152 aaKnown RBP12.98□□□□□ -0.33
RTN4-210ENST00000427710 MXRA7P84157 204 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 RPL18Q07020 188 aaKnown RBP12.98□□□□□ -0.33
RTN4-210ENST00000427710 ST3GAL3Q11203 375 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 Q5PR19 223 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 ANKRD16Q6P6B7 361 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 TBPL2Q6SJ96 375 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 TSEN54Q7Z6J9 526 aaKnown RBP12.98□□□□□ -0.33
RTN4-210ENST00000427710 FITM2Q8N6M3 262 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 OR6N1Q8NGY5 312 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 GTPBP3Q969Y2 492 aaKnown RBP12.98□□□□□ -0.33
RTN4-210ENST00000427710 CDRT15Q96T59 188 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 FNDC11Q9BVV2 318 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 IGHV1-18A0A0C4DH31 117 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 ATP6V1G2-DDX39BF2Z307 99 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 NDUFAB1O14561 156 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 DIRAS1O95057 198 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 PRSS23O95084 383 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 THRBP10828 461 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 MAKP20794 623 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 PTAFRP25105 342 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 CAPZA2P47755 286 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 CSNK1A1P48729 337 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 MYBPC1Q00872 1141 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 RUNX1T1Q06455 604 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 LAPTM4AQ15012 233 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 TRAM2Q15035 370 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 YTHDF3Q7Z739 585 aaKnown RBP12.97□□□□□ -0.33
RTN4-210ENST00000427710 MYPOPQ86VE0 399 aaPredicted RBP12.97□□□□□ -0.33
RTN4-210ENST00000427710 NRMQ8IXM6 262 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 DEFB107AQ8IZN7 70 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 OFCC1Q8IZS5 231 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 PGAM4Q8N0Y7 254 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 HTRA1Q92743 480 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 ULBP2Q9BZM5 246 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 MOKQ9UQ07 419 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 POFUT2Q9Y2G5 429 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 ZFHX3Q15911 3703 aa12.97□□□□□ -0.33
RTN4-210ENST00000427710 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 TLN2Q9Y4G6 2542 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 hCG_2039718K7EN88 272 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 CD8AP01732 235 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 SH3BGRP55822 239 aaPredicted RBP12.96□□□□□ -0.33
RTN4-210ENST00000427710 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.33
RTN4-210ENST00000427710 ZNF813Q6ZN06 617 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 SSX8Q7RTT4 187 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 MDP1Q86V88 176 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 IGFN1Q86VF2 1251 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 LRRC75A-AS1Q8N1F1 130 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 OR6X1Q8NH79 312 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 TMEM54Q969K7 222 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 BOD1Q96IK1 185 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 LRR1Q96L50 414 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 Q96MF0 132 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 SLC38A2Q96QD8 506 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 NOX3Q9HBY0 568 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 B3GAT2Q9NPZ5 323 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 DCAF13Q9NV06 445 aaKnown RBP12.96□□□□□ -0.33
RTN4-210ENST00000427710 FAM53CQ9NYF3 392 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 CD300AQ9UGN4 299 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 RPS6KA6Q9UK32 745 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 MGAT4BQ9UQ53 548 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.33
RTN4-210ENST00000427710 CR1P17927 2039 aa12.96□□□□□ -0.34
RTN4-210ENST00000427710 C2CD3Q4AC94 2353 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 TRAV27A0A087WT01 109 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 A0A087WUU8 490 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 ARPC4-TTLL3A0A0A6YYG9 625 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
RTN4-210ENST00000427710 NDUFS7O75251 213 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 FAM107AO95990 144 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 BCL10O95999 233 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 HLA-HP01893 362 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 CECR9P0C854 216 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 B4GALT1P15291 398 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 IFNA8P32881 189 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 FABP6P51161 128 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 IDH3GP51553 393 aaPredicted RBP12.95□□□□□ -0.34
RTN4-210ENST00000427710 ATP5J2P56134 94 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 PIGFQ07326 219 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 NPRL3Q12980 569 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
RTN4-210ENST00000427710 SHEQ5VZ18 495 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 SYT14Q8NB59 555 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 CCDC197Q8NCU1 140 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 MAGEE2Q8TD90 523 aaPredicted RBP12.95□□□□□ -0.34
RTN4-210ENST00000427710 ASB10Q8WXI3 467 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 BPIFA2Q96DR5 249 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 NSL1Q96IY1 281 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 ZNF347Q96SE7 839 aa12.95□□□□□ -0.34
RTN4-210ENST00000427710 TRAF4Q9BUZ4 470 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms