RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 DVL2O14641 736 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SLC16A6O15403 523 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 TSPAN19P0C672 248 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 PRR23D2P0DMB1 279 aaPredicted RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 CRABP1P29762 137 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CA7P43166 264 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CSNK1A1P48729 337 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 AQP4P55087 323 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CDK5Q00535 292 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 IL5RAQ01344 420 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 PMPCAQ10713 525 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 KRR1Q13601 381 aaKnown RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 SLC35F1Q5T1Q4 408 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 FAM214BQ7L5A3 538 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 KIF18BQ86Y91 864 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ARIH2OSQ8N7S6 290 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 POMGNT2Q8NAT1 580 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 OR52E2Q8NGJ4 325 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 MBD3L2Q8NHZ7 208 aaPredicted RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 PRR7Q8TB68 274 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 NRG4Q8WWG1 115 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 RFKQ969G6 155 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 TMEM45BQ96B21 275 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 HRASLS5Q96KN8 279 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ALG12Q9BV10 488 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 GRIP2Q9C0E4 1043 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CLN6Q9NWW5 311 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SEC14L4Q9UDX3 406 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 TINAGQ9UJW2 476 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 PROCRQ9UNN8 238 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 FLVCR1Q9Y5Y0 555 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SLC35F4A4IF30 521 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ZAR1LA6NP61 321 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SS18L1O75177 396 aaPredicted RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 AQP8O94778 261 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 TGM6O95932 706 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ACADSP16219 412 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CTSSP25774 331 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 GGT2P36268 569 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CENPAP49450 140 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ZNF84P51523 738 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.97
CD44-207ENST00000425428 MELKQ14680 651 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 THEM4Q5T1C6 240 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 RIPPLY2Q5TAB7 128 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SLX4IPQ5VYV7 408 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 LEG1Q6P5S2 330 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 FGD2Q7Z6J4 655 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ADGRE4PQ86SQ3 457 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 TUSC5Q8IXB3 177 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 OR8J1Q8NGP2 316 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 OR6K3Q8NGY3 331 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ASB10Q8WXI3 467 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SNX18Q96RF0 628 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 TTYH2Q9BSA4 534 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SFXN3Q9BWM7 321 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 PLA2G12AQ9BZM1 189 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CMC2Q9NRP2 79 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 MED29Q9NX70 200 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 CLEC4AQ9UMR7 237 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ADAM18Q9Y3Q7 739 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 HSPE1-MOB4S4R3N1 261 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 BOD1L1Q8NFC6 3051 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 ZNF716A6NP11 495 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 BHLHE40O14503 412 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 ZNHIT1O43257 154 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 TXNDC12O95881 172 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 AGTR1P30556 359 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 PCYT1AP49585 367 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 BLVRAP53004 296 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 RPS7P62081 194 aaKnown RBP8.98□□□□□ -0.97
CD44-207ENST00000425428 SIRPAP78324 504 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 TGFBR3Q03167 851 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 CAMK2DQ13557 499 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 LCN1P1Q5VSP4 162 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 MEDAGQ5VYS4 303 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 TMEM236Q5W0B7 351 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 CARD17Q5XLA6 110 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 ANKRD34AQ69YU3 496 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 THSD4Q6ZMP0 1018 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 C3P1Q6ZMU1 363 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 GID4Q8IVV7 300 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 GCNT2Q8N0V5 402 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 ZNF843Q8N446 348 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 IQCF1Q8N6M8 205 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 OR2T4Q8NH00 348 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 OR4K13Q8NH42 304 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 ASB5Q8WWX0 329 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 ZNF775Q96BV0 537 aaPredicted RBP8.98□□□□□ -0.97
CD44-207ENST00000425428 LRR1Q96L50 414 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 Q96M85 177 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 TSPAN32Q96QS1 320 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 ENKD1Q9H0I2 346 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 KCNN2Q9H2S1 579 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 SLCO5A1Q9H2Y9 848 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 PIGMQ9H3S5 423 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 FN3KQ9H479 309 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 RERGLQ9H628 205 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 C12orf49Q9H741 205 aa8.98□□□□□ -0.97
CD44-207ENST00000425428 MEMO1Q9Y316 297 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms