RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TEX19Q8NA77 164 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 CACNG6Q9BXT2 260 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 TSPAN10Q9H1Z9 355 aaPredicted RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 NIPAL2Q9H841 368 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 NANSQ9NR45 359 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 ABRACLQ9P1F3 81 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 ZFHX2Q9C0A1 2572 aaPredicted RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 TMEM72A0PK05 275 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 TVP23AA6NH52 213 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 ZNF879B4DU55 563 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 FABP7O15540 132 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 TCRBP04435 133 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 HTR2BP41595 481 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 OR1D4P47884 311 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 NANOS3P60323 173 aaKnown RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 CTXN1P60606 82 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 PITPNAQ00169 270 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 GALK2Q01415 458 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 FUT7Q11130 342 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 GGTLC2Q14390 218 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 ZNF528Q3MIS6 628 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 PHF19Q5T6S3 580 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 C1orf189Q5VU69 101 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 LILRB2Q8N423 598 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 ZNF615Q8N8J6 731 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 BEST4Q8NFU0 473 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 ZNF563Q8TA94 476 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 GRPEL2Q8TAA5 225 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 STMN3Q9NZ72 180 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 CDC14CA4D256 554 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ANKRD61A6NGH8 418 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 H3BUI4 141 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 SCDO00767 359 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZNF749O43361 778 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 GDF9O60383 454 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZNF780AO75290 641 aaPredicted RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZFPL1O95159 310 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 SRMP19623 302 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 STOMP27105 288 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 RPS27P42677 84 aaKnown RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 SOX2P48431 317 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 PRPS1P60891 318 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 BTG1P62324 171 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ODF4Q2M2E3 257 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 KLHL26Q53HC5 615 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ALG10Q5BKT4 473 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 OTPQ5XKR4 325 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 SLITRK4Q8IW52 837 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 PRSS58Q8IYP2 241 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 MRPL48Q96GC5 212 aaKnown RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 ADOQ96SZ5 270 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 KLHDC3Q9BQ90 382 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 EPHA6Q9UF33 1036 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 C17orf51A8MQB3 221 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ARPC3O15145 178 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 PIN1P1O15428 100 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 GATBO75879 557 aaKnown RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 ANKRD34CP0C6C1 535 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 IGLV3-21P80748 117 aaPredicted RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZSWIM7Q19AV6 140 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 WBP2NLQ6ICG8 309 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 FAM122CQ6P4D5 195 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 APOOLQ6UXV4 268 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 RABEPKQ7Z6M1 372 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 CMTM4Q8IZR5 234 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 BMPERQ8N8U9 685 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 SNAPC3Q92966 411 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 TSLPQ969D9 159 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ADAD1Q96M93 576 aaKnown RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 LRFN5Q96NI6 719 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 GON7Q9BXV9 100 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 NRSN2Q9GZP1 204 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 NXF5Q9H1B4 397 aaKnown RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 FGF21Q9NSA1 209 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 IKZF2Q9UKS7 526 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 KLHDC2Q9Y2U9 406 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 RIF1Q5UIP0 2472 aaKnown RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 TRIM77I1YAP6 450 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 GLCEO94923 617 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 UTS2O95399 124 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 MMP15P51511 669 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 HSD17B7P56937 341 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 GRM7Q14831 915 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZNF74Q16587 644 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 SLC35D3Q5M8T2 416 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 OVCH1Q7RTY7 1134 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 FAM220AQ7Z4H9 259 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.69□□□□□ -0.86
CUX1-205ENST00000425244 PLCZ1Q86YW0 608 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 TMEM151BQ8IW70 566 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZNF527Q8NB42 609 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 OR1L3Q8NH93 324 aa9.69□□□□□ -0.86
CUX1-205ENST00000425244 ZNF524Q96C55 264 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms