RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 HGFACQ04756 655 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 LOXL1Q08397 574 aaPredicted RBP22.13■■□□□ 1.13
SMDT1-202ENST00000422252 NPRL3Q12980 569 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 MMEL1Q495T6 779 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 ZNF627Q7L945 461 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 TSPYL5Q86VY4 417 aaPredicted RBP22.13■■□□□ 1.13
SMDT1-202ENST00000422252 SNX32Q86XE0 403 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 CALHM3Q86XJ0 350 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 OR6N1Q8NGY5 312 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 MPP4Q96JB8 637 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 SORCS2Q96PQ0 1159 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 TNFRSF13CQ96RJ3 184 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 ECSITQ9BQ95 431 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 ULBP2Q9BZM5 246 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 SLC19A3Q9BZV2 496 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 ADAM21Q9UKJ8 722 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 POFUT2Q9Y2G5 429 aa22.13■■□□□ 1.13
SMDT1-202ENST00000422252 ARFGEF3Q5TH69 2177 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 IGHV2OR16-5A0A0B4J2B6 119 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 BBIP1A8MTZ0 92 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 NPPAP01160 153 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 KLF10Q13118 480 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 EFNB3Q15768 340 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 REP15Q6BDI9 236 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 ZNF813Q6ZN06 617 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 SLC46A3Q7Z3Q1 461 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 NANOS1Q8WY41 292 aaKnown RBP22.12■■□□□ 1.13
SMDT1-202ENST00000422252 PROX1Q92786 737 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 ZNF426Q9BUY5 554 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 NANSQ9NR45 359 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 B3GNT2Q9NY97 397 aa22.12■■□□□ 1.13
SMDT1-202ENST00000422252 KPNA4O00629 521 aaPredicted RBP22.11■■□□□ 1.13
SMDT1-202ENST00000422252 MRASO14807 208 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 IFNGR1P15260 489 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 CSNK1A1P48729 337 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 BIDP55957 195 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 ZP4Q12836 540 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 SF3A3Q12874 501 aaKnown RBP eCLIP22.11■■□□□ 1.13
SMDT1-202ENST00000422252 MAPRE2Q15555 327 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 TMEM249Q2WGJ8 235 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 CGB2Q6NT52 195 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 IL17RDQ8NFM7 739 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 VRK1Q99986 396 aaPredicted RBP22.11■■□□□ 1.13
SMDT1-202ENST00000422252 PLK3Q9H4B4 646 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 ZNF442Q9H7R0 627 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 SAR1AQ9NR31 198 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 TAS2R5Q9NYW4 299 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 ZNF229Q9UJW7 825 aa22.11■■□□□ 1.13
SMDT1-202ENST00000422252 VSTM5A8MXK1 200 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 HLA-HP01893 362 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 VIMP08670 466 aaKnown RBP22.1■■□□□ 1.13
SMDT1-202ENST00000422252 CD79AP11912 226 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 B4GALT1P15291 398 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 CHD3Q12873 2000 aaKnown RBP22.1■■□□□ 1.13
SMDT1-202ENST00000422252 GSG1Q2KHT4 349 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 SLC35D2Q76EJ3 337 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 FOXB1Q99853 325 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 FBXO9Q9UK97 447 aaPredicted RBP22.1■■□□□ 1.13
SMDT1-202ENST00000422252 BAG5Q9UL15 447 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 SH3GLB1Q9Y371 365 aa22.1■■□□□ 1.13
SMDT1-202ENST00000422252 RNF13O43567 381 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 THBS4P35443 961 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 PPOXP50336 477 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 PDLIM4P50479 330 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 VLDLRP98155 873 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 ERICH5Q6P6B1 374 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 CARM1Q86X55 608 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 LRRC17Q8N6Y2 441 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 ANKS4BQ8N8V4 417 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 OR6X1Q8NH79 312 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 PRSS27Q9BQR3 290 aa22.09■■□□□ 1.13
SMDT1-202ENST00000422252 SONP18583 2426 aaKnown RBP22.08■■□□□ 1.13
SMDT1-202ENST00000422252 A8MV72 311 aaPredicted RBP22.08■■□□□ 1.13
SMDT1-202ENST00000422252 HIST1H2ABP04908 130 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 ASAH2BP0C7U1 165 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 UMPSP11172 480 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 NPR2P20594 1047 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 HIST3H2AQ7L7L0 130 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 PCYOX1LQ8NBM8 494 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 HIST1H2ACQ93077 130 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 TMEM54Q969K7 222 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 ZNF583Q96ND8 569 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 NOX3Q9HBY0 568 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 MYOZ1Q9NP98 299 aaPredicted RBP22.08■■□□□ 1.13
SMDT1-202ENST00000422252 MEPEQ9NQ76 525 aaPredicted RBP22.08■■□□□ 1.13
SMDT1-202ENST00000422252 GLTPQ9NZD2 209 aa22.08■■□□□ 1.13
SMDT1-202ENST00000422252 LOC100653049A0A140TA62 436 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 hCG_2039718K7EN88 272 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 NDUFS8O00217 210 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 KRT34O76011 436 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 IFNA14P01570 189 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 USF1P22415 310 aaPredicted RBP22.07■■□□□ 1.12
SMDT1-202ENST00000422252 PIGFQ07326 219 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 DAG1Q14118 895 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 C6orf52Q5T4I8 152 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 C10orf82Q8WW14 230 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 ZNF566Q969W8 418 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 ZNF75AQ96N20 296 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 PIMREGQ9BSJ6 248 aa22.07■■□□□ 1.12
SMDT1-202ENST00000422252 POLR2J2Q9GZM3 115 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms