RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 RDH5Q92781 318 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 TMEM109Q9BVC6 243 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 CALML5Q9NZT1 146 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 SLAMF8Q9P0V8 285 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 POFUT2Q9Y2G5 429 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 IFT52Q9Y366 437 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 SPEF1Q9Y4P9 236 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 NOX1Q9Y5S8 564 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 CACNG2Q9Y698 323 aa6.94□□□□□ -1.3
VIM-202ENST00000421459 HEATR1Q9H583 2144 aaKnown RBP6.94□□□□□ -1.3
VIM-202ENST00000421459 A0A087WUJ7 227 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 C11orf98E9PRG8 122 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 CLIC1O00299 241 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 TM9SF1O15321 606 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 HDAC3O15379 428 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 FZD7O75084 574 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 RP2O75695 350 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 IL6P05231 212 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 HOXB9P17482 250 aaPredicted RBP6.93□□□□□ -1.3
VIM-202ENST00000421459 ACHEP22303 614 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 AHCYP23526 432 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 PAX7P23759 505 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 GLRXP35754 106 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 EVX1P49640 407 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 POLR2JP52435 117 aaKnown RBP6.93□□□□□ -1.3
VIM-202ENST00000421459 CCL8P80075 99 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 PMS2P3Q13401 168 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 OR1Q1Q15612 314 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 PDCD4Q53EL6 469 aaKnown RBP6.93□□□□□ -1.3
VIM-202ENST00000421459 ALG10BQ5I7T1 473 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 C6orf89Q6UWU4 347 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 MSRB3Q8IXL7 192 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 C10orf53Q8N6V4 93 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 C3orf56Q8N813 242 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 GLB1L3Q8NCI6 653 aaPredicted RBP6.93□□□□□ -1.3
VIM-202ENST00000421459 IL17RDQ8NFM7 739 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 OR6N1Q8NGY5 312 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 C22orf15Q8WYQ4 148 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 GTF2H4Q92759 462 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 GCDHQ92947 438 aaPredicted RBP6.93□□□□□ -1.3
VIM-202ENST00000421459 SLC38A4Q969I6 547 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 ITCHQ96J02 903 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 FOXB1Q99853 325 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 SH3GL3Q99963 347 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 C1QTNF5Q9BXJ0 243 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 ULBP2Q9BZM5 246 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 MS4A5Q9H3V2 200 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 BCL2L10Q9HD36 194 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 A4GALTQ9NPC4 353 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 ESM1Q9NQ30 184 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 SLC25A37Q9NYZ2 338 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 TAAR3PQ9P1P4 343 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 FBXO9Q9UK97 447 aaPredicted RBP6.93□□□□□ -1.3
VIM-202ENST00000421459 PCDHB10Q9UN67 800 aa6.93□□□□□ -1.3
VIM-202ENST00000421459 LOC102725191A0A1B0GVB3 256 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 A0A1W2PPW3 197 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 TMEM89A2RUT3 159 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 TMEM247A6NEH6 219 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 ZNF726A6NNF4 738 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 C5orf58C9J3I9 102 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 PLPP3O14495 311 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 PLPP2O43688 288 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 OR2T1O43869 369 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 SNNO75324 88 aaPredicted RBP6.92□□□□□ -1.3
VIM-202ENST00000421459 RAB36O95755 333 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 IDO1P14902 403 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 EPHA1P21709 976 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 AQP1P29972 269 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 CDH12P55289 794 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 BIDP55957 195 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 GALK2Q01415 458 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 GLO1Q04760 184 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 LRRC74AQ0VAA2 488 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 MELKQ14680 651 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 TNFAIP8L3Q5GJ75 292 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 TMEM255AQ5JRV8 349 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 CEP85LQ5SZL2 805 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 HHATQ5VTY9 493 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 SHQ1Q6PI26 577 aaKnown RBP6.92□□□□□ -1.3
VIM-202ENST00000421459 ZNF627Q7L945 461 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 CCDC36Q8IYA8 594 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 LSMEM1Q8N8F7 131 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 OR51F2Q8NH61 342 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 BBS10Q8TAM1 723 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 ZNF418Q8TF45 676 aaPredicted RBP6.92□□□□□ -1.3
VIM-202ENST00000421459 TAF15Q92804 592 aaKnown RBP eCLIP6.92□□□□□ -1.3
VIM-202ENST00000421459 SLC41A3Q96GZ6 507 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 MAELQ96JY0 434 aaKnown RBP6.92□□□□□ -1.3
VIM-202ENST00000421459 LRR1Q96L50 414 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 SLC6A7Q99884 636 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 TMPRSS13Q9BYE2 586 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 ARMC7Q9H6L4 198 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 ZNF665Q9H7R5 613 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 CACYBPQ9HB71 228 aaKnown RBP6.92□□□□□ -1.3
VIM-202ENST00000421459 MOV10Q9HCE1 1003 aaKnown RBP6.92□□□□□ -1.3
VIM-202ENST00000421459 SSU72Q9NP77 194 aaKnown RBP6.92□□□□□ -1.3
VIM-202ENST00000421459 G6PC2Q9NQR9 355 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 GRIP1Q9Y3R0 1128 aa6.92□□□□□ -1.3
VIM-202ENST00000421459 A0A0A6YYJ9 748 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 TRPC5OSA6NMA1 111 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms