RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 POP4O95707 220 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 EOMESO95936 686 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 RPLP2P05387 115 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 F3P13726 295 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 NQO2P16083 231 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CPT2P23786 658 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 AVPR2P30518 371 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 PDX1P52945 283 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 NANOS3P60323 173 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 DUSP2Q05923 314 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 AIMP2Q13155 320 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 PNLIPRP3Q17RR3 467 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ALG11Q2TAA5 492 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 OR52W1Q6IF63 320 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 DPPA4Q7L190 304 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TMPRSS12Q86WS5 348 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 C2orf73Q8N5S3 287 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TMED6Q8WW62 240 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TAAR9Q96RI9 348 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TRPV4Q9HBA0 871 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ASH2LQ9UBL3 628 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 LPAR3Q9UBY5 353 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 STEAP1Q9UHE8 339 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 FBXO4Q9UKT5 387 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 NOP16Q9Y3C1 178 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TRAV27A0A087WT01 109 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TBC1D3EA0A087X179 549 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CCL15-CCL14A0A0B4J2E2 113 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A0G2JN53 185 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TEX13DA0A0J9YY54 714 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ARGFXA6NJG6 315 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 BLOC1S5-TXNDC5H3BN57 136 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 SMAD9O15198 467 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 VEGFDO43915 354 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CTAG2O75638 210 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 IFNGP01579 166 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 RBM34P42696 430 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 FKBP1BP68106 108 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ELAVL1Q15717 326 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CCL15Q16663 113 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ATPAF1Q5TC12 328 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 NKAIN2Q5VXU1 208 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 OR10K2Q6IF99 312 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 PRSS55Q6UWB4 352 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CXCL17Q6UXB2 119 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF836Q6ZNA1 936 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 FRRS1Q6ZNA5 592 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 Q6ZNB5 142 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 RANBP3LQ86VV4 465 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 C17orf64Q86WR6 236 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CCDC116Q8IYX3 515 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CDK20Q8IZL9 346 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 GABRG1Q8N1C3 465 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 NUDCD2Q8WVJ2 157 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CNRIP1Q96F85 164 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 MAP3K3Q99759 626 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TSPAN10Q9H1Z9 355 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 PRSS16Q9NQE7 514 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 HEATR5BQ9P2D3 2071 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 C9orf170A2RU37 121 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 RNASEK-C17orf49H0YIS7 233 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC34A2O95436 690 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CKMP06732 381 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CTSLP07711 333 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 GABRR2P28476 465 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 PRSS3P35030 304 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ACTBP60709 375 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ACTG1P63261 375 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 NR0B2Q15466 257 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF750Q32MQ0 723 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 C9orf64Q5T6V5 341 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 OR4C11Q6IEV9 310 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ARHGAP11AQ6P4F7 1023 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ETV3LQ6ZN32 361 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TMCO2Q7Z6W1 182 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC35F3Q8IY50 421 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 OR51A7Q8NH64 312 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 OCSTAMPQ9BR26 566 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 SEMA6CQ9H3T2 930 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 PELI2Q9HAT8 420 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 HS3ST2Q9Y278 367 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TICRRQ7Z2Z1 1910 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A1B0GV90 55 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 FEZF1A0PJY2 475 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 LYPD3O95274 346 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 WNT11O96014 354 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 PGAM2P15259 253 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 RIDAP52758 137 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TAS2R19P59542 299 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 FAM76BQ5HYJ3 339 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 RTN4RL1Q86UN2 441 aaPredicted RBP7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF227Q86WZ6 799 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 NUP43Q8NFH3 380 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 OR4K17Q8NGC6 315 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TOLLIPQ9H0E2 274 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 XKR8Q9H6D3 395 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TUBA4BQ9H853 241 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 TCF20Q9UGU0 1960 aaKnown RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 DBX1A6NMT0 343 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 265.2 ms