RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 NCCRP1Q6ZVX7 275 aaPredicted RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CCDC71Q8IV32 467 aaPredicted RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CA5BP1Q8WTZ4 195 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CYGBQ8WWM9 190 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF566Q969W8 418 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CCDC120Q96HB5 630 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 GPA33Q99795 319 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 EMC6Q9BV81 110 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ULBP2Q9BZM5 246 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 SLCO5A1Q9H2Y9 848 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 PIGMQ9H3S5 423 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 RERGLQ9H628 205 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 BCO1Q9HAY6 547 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 IMPAD1Q9NX62 359 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 SMPD3Q9NY59 655 aaPredicted RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 USE1Q9NZ43 259 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 Q9UFV3 132 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 KLHL21Q9UJP4 597 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF346Q9UL40 294 aaKnown RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 RCE1Q9Y256 329 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ADAM18Q9Y3Q7 739 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 EPG5Q9HCE0 2579 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 SPTA1P02549 2419 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 IGKV3D-15A0A087WSY6 115 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 LOC102725191A0A1B0GVB3 256 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 NPIPB13A6NJU9 1138 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 NPIPB4C9JG80 1138 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF587BE7ETH6 402 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 J3QKU1 62 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 M0R3G1 203 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 IMPA2O14732 288 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 CASQ2O14958 399 aaPredicted RBP7.52□□□□□ -1.21
TRIM48-201ENST00000417545 TRAF3IP2O43734 574 aaPredicted RBP7.52□□□□□ -1.21
TRIM48-201ENST00000417545 IDH3BO43837 385 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 FZD7O75084 574 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 PTP4A3O75365 173 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 IGHV3-9P01782 118 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 IGHMP01871 453 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 HMGN1P05114 100 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ALPLP05186 524 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ACADSP16219 412 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 SDHAP31040 664 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 HOXC12P31275 282 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 CEACAM8P31997 349 aaPredicted RBP7.52□□□□□ -1.21
TRIM48-201ENST00000417545 GRK5P34947 590 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 VHLP40337 213 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 CENPAP49450 140 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 SELENOPP49908 381 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF84P51523 738 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 P2RY4P51582 365 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 CDC42P60953 191 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 PPP2R2BQ00005 443 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 MYBPC1Q00872 1141 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 FOXF2Q12947 444 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 NPRL3Q12980 569 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 GINS1Q14691 196 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 PGGHGQ32M88 737 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 OGFRL1Q5TC84 451 aaPredicted RBP7.52□□□□□ -1.21
TRIM48-201ENST00000417545 FBXW10Q5XX13 1052 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ANKRD34AQ69YU3 496 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 LEG1Q6P5S2 330 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 VWA1Q6PCB0 445 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 DNM1P34Q6PK57 102 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 LUZP2Q86TE4 346 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ADCK1Q86TW2 530 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 KIF18BQ86Y91 864 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 MED12LQ86YW9 2145 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 PARP8Q8N3A8 854 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 IQCF1Q8N6M8 205 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 POMGNT2Q8NAT1 580 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 NOXO1Q8NFA2 376 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 FNDC8Q8TC99 324 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ASB10Q8WXI3 467 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 TMEM45BQ96B21 275 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 RASD2Q96D21 266 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 SLC25A44Q96H78 314 aaPredicted RBP7.52□□□□□ -1.21
TRIM48-201ENST00000417545 Q96M85 177 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 RDH12Q96NR8 316 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF385AQ96PM9 386 aaKnown RBP7.52□□□□□ -1.21
TRIM48-201ENST00000417545 TSPAN32Q96QS1 320 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 RBP7Q96R05 134 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 DMRTA2Q96SC8 542 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 PLA2G12AQ9BZM1 189 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 IL20Q9NYY1 176 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 B3GAT1Q9P2W7 334 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF629Q9UEG4 869 aaPredicted RBP7.52□□□□□ -1.21
TRIM48-201ENST00000417545 RNF6Q9Y252 685 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 GMPPBQ9Y5P6 360 aa7.52□□□□□ -1.21
TRIM48-201ENST00000417545 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 CIB4A0PJX0 185 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 H7C1C5 153 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 TOXO94900 526 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 IL18BPO95998 194 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 IGFBP1P08833 259 aaPredicted RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 APEHP13798 732 aaKnown RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 PLA2G2AP14555 144 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 PTDSS1P48651 473 aaKnown RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 HSPA13P48723 471 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 LCN6P62502 163 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms