RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 B3GNT2Q9NY97 397 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 TRAPPC13A5PLN9 417 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF503-AS2A6NEH8 195 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 VWC2LB2RUY7 222 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 SEC14L2O76054 403 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 NPR2P20594 1047 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 CD247P20963 164 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 THBS4P35443 961 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 PPOXP50336 477 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 LSM11P83369 360 aaKnown RBP eCLIP15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 ZP4Q12836 540 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 CAMK2DQ13557 499 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 GSG1Q2KHT4 349 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 VMACQ2NL98 169 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 CHRFAM7AQ494W8 412 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 NANOGP8Q6NSW7 305 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 PODNL1Q6PEZ8 512 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF813Q6ZN06 617 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 CCDC80Q76M96 950 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 MYPOPQ86VE0 399 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 VANGL1Q8TAA9 524 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 ADAMTS16Q8TE57 1224 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 TAMM41Q96BW9 452 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 SH3GL1Q99961 368 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 PIMREGQ9BSJ6 248 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 ULBP2Q9BZM5 246 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 DENND2DQ9H6A0 471 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 NANOGQ9H9S0 305 aa15.24■□□□□ 0.03
PDLIM2-208ENST00000416159 LOC390937A0A1W2PQ73 354 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 C11orf98E9PRG8 122 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 SERPINI2O75830 405 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 LYPD3O95274 346 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 CH25HO95992 272 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 CSNK1A1P48729 337 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 GZMMP51124 257 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF74Q16587 644 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 TRMT5Q32P41 509 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 WDR88Q6ZMY6 472 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 RBM45Q8IUH3 476 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 ANKS4BQ8N8V4 417 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 OR4D11Q8NGI4 311 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 KCNK17Q96T54 332 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 DOK1Q99704 481 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 FOXB1Q99853 325 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 TMEM120AQ9BXJ8 343 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 SLC19A3Q9BZV2 496 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 PCDHAC1Q9H158 963 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 NANSQ9NR45 359 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 TMEM160Q9NX00 188 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 SLC7A7Q9UM01 511 aa15.23■□□□□ 0.03
PDLIM2-208ENST00000416159 hCG_2039718K7EN88 272 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 FBP2O00757 339 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 HLA-HP01893 362 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 THY1P04216 161 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 HIST1H2ABP04908 130 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 ERCC1P07992 297 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 CD79AP11912 226 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 IFNGR1P15260 489 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 NR4A2P43354 598 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 GZMKP49863 264 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 BIDP55957 195 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 DAG1Q14118 895 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 CARTPTQ16568 116 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 SLC35D2Q76EJ3 337 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 HIST3H2AQ7L7L0 130 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 SPATA21Q7Z572 469 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 WDFY1Q8IWB7 410 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF540Q8NDQ6 660 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 OR6X1Q8NH79 312 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 NEU4Q8WWR8 484 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 HIST1H2ACQ93077 130 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 TMEM54Q969K7 222 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 ECSITQ9BQ95 431 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 NOX3Q9HBY0 568 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 CDC42EP3Q9UKI2 254 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 SPEF1Q9Y4P9 236 aa15.22■□□□□ 0.03
PDLIM2-208ENST00000416159 TMEM129A0AVI4 362 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 ENTPD5O75356 428 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 NPPAP01160 153 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 IGHV4-31P0DP07 118 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 TROVE2P10155 538 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 B4GALT1P15291 398 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 NR4A1P22736 598 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 SNTB2Q13425 540 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 GGTLC2Q14390 218 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 MMEL1Q495T6 779 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 COQ5Q5HYK3 327 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 CXXC5Q7LFL8 322 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 PIWIL3Q7Z3Z3 882 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 OR8J3Q8NGG0 315 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 LRRC58Q96CX6 371 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF75AQ96N20 296 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 FOXN4Q96NZ1 517 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF426Q9BUY5 554 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 TAS2R5Q9NYW4 299 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 GLTPQ9NZD2 209 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF229Q9UJW7 825 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 FBXL3Q9UKT7 428 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 CMAHPQ9Y471 501 aa15.21■□□□□ 0.03
PDLIM2-208ENST00000416159 ANK3Q12955 4377 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms