RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TAAR6Q96RI8 345 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 TAAR1Q96RJ0 339 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 SPAG8Q99932 426 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 OPRPNQ99935 248 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 DHRS9Q9BPW9 319 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF559Q9BR84 538 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM246Q9BRR3 403 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 NAA50Q9GZZ1 169 aaKnown RBP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM49AQ9H0Q0 323 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATG10Q9H0Y0 220 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM245Q9H330 911 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 ARMC7Q9H6L4 198 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 KAT8Q9H7Z6 458 aaKnown RBP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 GEMIN7Q9H840 131 aaKnown RBP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 MARCH7Q9H992 704 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 CHST11Q9NPF2 352 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 TREX1Q9NSU2 369 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 MAN2C1Q9NTJ4 1040 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 AIG1Q9NVV5 245 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 CMTM6Q9NX76 183 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 CLEC5AQ9NY25 188 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLCO1C1Q9NYB5 712 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 RDH8Q9NYR8 311 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 PTTG3PQ9NZH4 202 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 FLRT3Q9NZU0 649 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 WARS2Q9UGM6 360 aaKnown RBP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 PHF11Q9UIL8 331 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF229Q9UJW7 825 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF221Q9UK13 617 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 STUB1Q9UNE7 303 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 GPR132Q9UNW8 380 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 PUS1Q9Y606 427 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 FER1L6Q2WGJ9 1857 aa3.21□□□□□ -1.9
HMGB3P23-201ENST00000414981 NRXN2Q9P2S2 1712 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 IGHV4-61A0A0C4DH41 118 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 LOC100130705A0A1B0GUX0 176 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM92AA1XBS5 289 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MEIOCA2RUB1 952 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM150BA6NC51 233 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 METTL15A6NJ78 407 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PDZK1P1A8MUH7 402 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 EFCAB9A8MZ26 197 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 E9PQ18 207 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TEX46H3BTG2 121 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 AZIN1O14977 448 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 STX7O15400 261 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MFSD11O43934 449 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CREG1O75629 220 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 UPK3AO75631 287 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCNKO75909 580 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 AP2A2O94973 939 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCNB2O95067 398 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 SNAP29O95721 258 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CRYZL1O95825 349 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PGK1P00558 417 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 IGHV4-59P01825 116 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MT-ND1P03886 318 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 B4GALT1P15291 398 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 NQO2P16083 231 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PAICSP22234 425 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 WARSP23381 471 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC6A6P31641 620 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 FCGR2BP31994 310 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CD80P33681 288 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 EPHX2P34913 555 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 POLR2IP36954 125 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 SPAM1P38567 509 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TNFSF9P41273 254 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MAGEA2P43356 314 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MAGEA11P43364 429 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 C1QTNF8P60827 252 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 IFITM3Q01628 133 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZFP36L1Q07352 338 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 LAMTOR4Q0VGL1 99 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PPP1R8Q12972 351 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 BAMBIQ13145 260 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 NME3Q13232 169 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ILKQ13418 452 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TNK1Q13470 666 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 AQP6Q13520 282 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM187Q14656 261 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MELKQ14680 651 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM132DQ14C87 1099 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CA9Q16790 459 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 GOLGA7BQ2TAP0 167 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 DCAF4L1Q3SXM0 396 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZFP69Q49AA0 526 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 YIF1BQ5BJH7 314 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 XKR7Q5GH72 579 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 XKR4Q5GH76 650 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 BRMS1LQ5PSV4 323 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNLSQ5VYX0 342 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PLCXD3Q63HM9 321 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 GLYATQ6IB77 296 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 METTL7BQ6UX53 244 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CYHR1Q6ZMK1 362 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PAGE2Q7Z2X7 111 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 DCXRQ7Z4W1 244 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 LDB1Q86U70 411 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC51BQ86UW2 128 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms