RNA–Protein interactions for RNA: ENST00000414301.5

SEMA3F-203, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-203ENST00000414301 METTL21CQ5VZV1 264 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 TTC33Q6PID6 262 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 LINC00114Q6XXX2 140 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 SPATA21Q7Z572 469 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 PATL1Q86TB9 770 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 MYPOPQ86VE0 399 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 SLC30A8Q8IWU4 369 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 ZNF540Q8NDQ6 660 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 OR6T1Q8NGN1 323 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 OR5J2Q8NH18 312 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 DOK1Q99704 481 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 ZNF385DQ9H6B1 395 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 ZNF442Q9H7R0 627 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 KAT8Q9H7Z6 458 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 NPHS2Q9NP85 383 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 B3GNT2Q9NY97 397 aa13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 CHD3Q12873 2000 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-203ENST00000414301 A0A0G2JND7 137 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 SH3PXD2BA1X283 911 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 CPSF4LA6NMK7 179 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 VWC2LB2RUY7 222 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 C11orf98E9PRG8 122 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 CHP2O43745 196 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 HIST1H2ABP04908 130 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 PPOXP50336 477 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 DAG1Q14118 895 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 GSG1Q2KHT4 349 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 ENTPD8Q5MY95 495 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 INTS11Q5TA45 600 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 HIST3H2AQ7L7L0 130 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 RBM45Q8IUH3 476 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 SVOPLQ8N434 492 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 GPR32P1Q8NGA4 272 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 OR10A6Q8NH74 314 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 VANGL1Q8TAA9 524 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 HIST1H2ACQ93077 130 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 ULBP2Q9BZM5 246 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 TMEM160Q9NX00 188 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 SPEF1Q9Y4P9 236 aa13.89□□□□□ -0.19
SEMA3F-203ENST00000414301 TMEM129A0AVI4 362 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 RNF212BA8MTL3 300 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 LMX1BO60663 402 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 EDF1O60869 148 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 CH25HO95992 272 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 FAM157CP0CG43 387 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 IFNGR1P15260 489 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 NR4A1P22736 598 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 CSNK1A1P48729 337 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 BIDP55957 195 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 CYLC2Q14093 348 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 NPTX1Q15818 432 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 KRT80Q6KB66 452 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 ZNF627Q7L945 461 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 ZCCHC24Q8N2G6 241 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 NEU4Q8WWR8 484 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 SIKE1Q9BRV8 207 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 SHARPINQ9H0F6 387 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 VIPAS39Q9H9C1 493 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 NOX3Q9HBY0 568 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 NANSQ9NR45 359 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 ARGLU1Q9NWB6 273 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 CMAHPQ9Y471 501 aa13.88□□□□□ -0.19
SEMA3F-203ENST00000414301 RTTNQ86VV8 2226 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 LOC100289279A0A1B0GTE1 492 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 RNF13O43567 381 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 APEHP13798 732 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 DAOP14920 347 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 B4GALT1P15291 398 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 PCGF2P35227 344 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 PTDSS1P48651 473 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 RAB1AP62820 205 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 ZP4Q12836 540 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 SNTB2Q13425 540 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 ZNF74Q16587 644 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 TRMT5Q32P41 509 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 SLC35D2Q76EJ3 337 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 WDFY1Q8IWB7 410 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 OR4D11Q8NGI4 311 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 OR6X1Q8NH79 312 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 ADAMTS16Q8TE57 1224 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 RASSF5Q8WWW0 418 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 TAMM41Q96BW9 452 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 MPP4Q96JB8 637 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 FOXB1Q99853 325 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 SH3GL1Q99961 368 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 DENND2DQ9H6A0 471 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 DYNLRB1Q9NP97 96 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 TAS2R5Q9NYW4 299 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 GLTPQ9NZD2 209 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 LPAR3Q9UBY5 353 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 SLC7A7Q9UM01 511 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 MXRA5Q9NR99 2828 aa13.87□□□□□ -0.19
SEMA3F-203ENST00000414301 ARFGEF3Q5TH69 2177 aa13.86□□□□□ -0.19
SEMA3F-203ENST00000414301 IGHV4-61A0A0C4DH41 118 aa13.86□□□□□ -0.19
SEMA3F-203ENST00000414301 LYPD3O95274 346 aa13.86□□□□□ -0.19
SEMA3F-203ENST00000414301 STAMBPO95630 424 aa13.86□□□□□ -0.19
SEMA3F-203ENST00000414301 RAB36O95755 333 aa13.86□□□□□ -0.19
SEMA3F-203ENST00000414301 THY1P04216 161 aa13.86□□□□□ -0.19
SEMA3F-203ENST00000414301 VIMP08670 466 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms