RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 WDR76Q9H967 626 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GALNT9Q9HCQ5 603 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 TXNL4BQ9NX01 149 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GDF2Q9UK05 429 aaPredicted RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 RAB23Q9ULC3 237 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 EXOGQ9Y2C4 368 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 RPS10-NUDT3A0A1W2PQS6 291 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 ZAR1LA6NP61 321 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 IFNL4K9M1U5 179 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 FFAR3O14843 346 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 CTDSPLO15194 276 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GPR42O15529 346 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 SNAPC5O75971 98 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 IFNA6P05013 189 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GRPP07492 148 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 ANXA3P12429 323 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 ATP1B2P14415 290 aaPredicted RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 C4BPBP20851 252 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 STOMP27105 288 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 SOX3P41225 446 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 NSG1P42857 185 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 SNRPGP62308 76 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 MXD1Q05195 221 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 MTAPQ13126 283 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 NAE1Q13564 534 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 PTGES3Q15185 160 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 C18orf21Q32NC0 220 aaPredicted RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 PTCHD3Q3KNS1 767 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 HSD17B12Q53GQ0 312 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 TMEM107Q6UX40 140 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GALNT10Q86SR1 603 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 ANKRD46Q86W74 232 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 NANOGP1Q8N7R0 232 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 DTX3Q8N9I9 347 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 OR13C9Q8NGT0 318 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 OSTF1Q92882 214 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 UCN3Q969E3 161 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GFM1Q96RP9 751 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 HEXA-AS1Q9H8Q6 139 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 LYARQ9NX58 379 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 KIF25Q9UIL4 384 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GSTK1Q9Y2Q3 226 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 DHRS7Q9Y394 339 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 RPL36Q9Y3U8 105 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 OARD1Q9Y530 152 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 CACNA1IQ9P0X4 2223 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 IGLV3-16A0A075B6K0 115 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 A0A1B0GVI7 797 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 CIB4A0PJX0 185 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 LNP1A1A4G5 178 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 ARRDC5A6NEK1 342 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 PI15O43692 258 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 SIGLEC6O43699 453 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 CHP2O43745 196 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 CD1AP06126 327 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 HNF1AP20823 631 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 PRPH2P23942 346 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 APEX1P27695 318 aaKnown RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 CRISP1P54107 249 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 FAM3BP58499 235 aaPredicted RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 SELENOWP63302 87 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 SIM1P81133 766 aaPredicted RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 DBPQ10586 325 aaPredicted RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 PMS2CLQ68D20 193 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 TMEM211Q6ICI0 200 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF730Q6ZMV8 503 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 MBOAT1Q6ZNC8 495 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF621Q6ZSS3 439 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 CATSPERDQ86XM0 798 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 TRAPPC5Q8IUR0 188 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 OR10S1Q8NGN2 331 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 SPPL2AQ8TCT8 520 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 SNX33Q8WV41 574 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 SKA2Q8WVK7 121 aaPredicted RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 UFD1Q92890 307 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 FAM46BQ96A09 425 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 CMTM7Q96FZ5 175 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 PDXPQ96GD0 296 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 NIPSNAP1Q9BPW8 284 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 C6orf106Q9H6K1 298 aaPredicted RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 ACSL5Q9ULC5 683 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 DIMT1Q9UNQ2 313 aaKnown RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 PRAMEF25A6NGN4 478 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 FBLL1A6NHQ2 334 aaKnown RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 EPHA1P21709 976 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 ACTR1BP42025 376 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 ARRB1P49407 418 aaPredicted RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 EVX1P49640 407 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 SPCS3P61009 180 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 IRF8Q02556 426 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 PMPCAQ10713 525 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 EXOSC2Q13868 293 aaKnown RBP8.56□□□□□ -1.04
SNHG3-201ENST00000413987 PHF19Q5T6S3 580 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 CD276Q5ZPR3 534 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 C3orf33Q6P1S2 294 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF547Q8IVP9 402 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 KCNG3Q8TAE7 436 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 UBTD2Q8WUN7 234 aa8.56□□□□□ -1.04
SNHG3-201ENST00000413987 DACT3Q96B18 629 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms