RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 C10orf53Q8N6V4 93 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 CNNM3Q8NE01 707 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 VN1R2Q8NFZ6 395 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 C15orf40Q8WUR7 153 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 C17orf50Q8WW18 174 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 GEMIN6Q8WXD5 167 aaKnown RBP0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 MRPS31Q92665 395 aaKnown RBP0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 SMIM10Q96HG1 83 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 AKR1E2Q96JD6 320 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 TSSK3Q96PN8 268 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 SECISBP2Q96T21 854 aaKnown RBP0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 C2orf40Q9H1Z8 148 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 UBE2ZQ9H832 354 aaPredicted RBP0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 MEAF6Q9HAF1 191 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 MID1IP1Q9NPA3 183 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 IL26Q9NPH9 171 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 THUMPD1Q9NXG2 353 aaKnown RBP0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 KCNIP1Q9NZI2 227 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 GSTK1Q9Y2Q3 226 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 MRPS18BQ9Y676 258 aaKnown RBP0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 MDN1Q9NU22 5596 aa0.19□□□□□ -2.38
RNU2-55P-201ENST00000411146 GBF1Q92538 1859 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 IGHV3-74A0A0B4J1X5 117 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 LOC110117498-PIK3R3F6TDL0 507 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 LANCL1O43813 399 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 PFKFB2O60825 505 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR4F21O95013 312 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 H6PDO95479 791 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 HLA-DQA1P01909 254 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 HLA-DQB1P01920 261 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 ZNF735P0CB33 412 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 C1GALT1C1LP0DN25 315 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 COX5AP20674 150 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 TBXA2RP21731 343 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 SFNP31947 248 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 ADRA1AP35348 466 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 NAMPTP43490 491 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 RFX3P48380 749 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 PKNOX1P55347 436 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 MORF4L2Q15014 288 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 RGNQ15493 299 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 CCDC40Q4G0X9 1142 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 SAMD4BQ5PRF9 694 aaKnown RBP0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 NAA40Q86UY6 237 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 BCORP1Q8N888 145 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 FAM71CQ8NEG0 241 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 ZNF680Q8NEM1 530 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR56B1Q8NGI3 324 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 HTR3CQ8WXA8 447 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 TM4SF18Q96CE8 201 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 FLYWCH2Q96CP2 140 aaKnown RBP0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 SEC22AQ96IW7 307 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 CABS1Q96KC9 395 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 ZNF681Q96N22 645 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 AMDHD1Q96NU7 426 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 CAMK2N2Q96S95 79 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 ECSITQ9BQ95 431 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 GSDMCQ9BYG8 508 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 SYNDIG1Q9H7V2 258 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 FN3KRPQ9HA64 309 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 SGK2Q9HBY8 427 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 SLC17A5Q9NRA2 495 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 GLRX2Q9NS18 164 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 IL36GQ9NZH8 169 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 EPS15L1Q9UBC2 864 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 GNG12Q9UBI6 72 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 KIAA1257Q9ULG3 409 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 MSH6P52701 1360 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 CARMIL1Q5VZK9 1371 aa0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 RPAP1Q9BWH6 1393 aaPredicted RBP0.18□□□□□ -2.38
RNU2-55P-201ENST00000411146 MUC5BQ9HC84 5762 aaPredicted RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 CENPJQ9HC77 1338 aaPredicted RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 BAZ2AQ9UIF9 1905 aaKnown RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR1F1O43749 312 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 TOM1L1O75674 476 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 CNMDO75829 334 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 CD74P04233 296 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 IGKV1-16P04430 117 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 FABP3P05413 133 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 CCDC130P13994 396 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 POU2F1P14859 743 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 TCP1P17987 556 aaKnown RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 WARSP23381 471 aaKnown RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 ATP5DP30049 168 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 TNFSF9P41273 254 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 GYG1P46976 350 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 P2RY1P47900 373 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 PLA2G16P53816 162 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 DEFB103AP81534 67 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 PRB3Q04118 309 aaPredicted RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 MYO9BQ13459 2157 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 VGLL4Q14135 290 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 IHHQ14623 411 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 GINS1Q14691 196 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 DEFB134Q4QY38 66 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 FAM71F2Q6NXP2 309 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 PGAP1Q75T13 922 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 IQCA1Q86XH1 822 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 SLC38A6Q8IZM9 456 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 MREGQ8N565 214 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms