RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 OR6X1Q8NH79 312 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 RP9Q8TA86 221 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 NANOS1Q8WY41 292 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 ZNF583Q96ND8 569 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 CA10Q9NS85 328 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 GDF2Q9UK05 429 aaPredicted RBP12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 POFUT2Q9Y2G5 429 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 SPEF1Q9Y4P9 236 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 ZANQ9Y493 2812 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 PLCE1Q9P212 2302 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 CPSF4LA6NMK7 179 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 CENPBD1B2RD01 187 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 M0R3G1 203 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 NDUFS8O00217 210 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 CCDC22O60826 627 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 KRT34O76011 436 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 OR5F1O95221 314 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 HPRP00739 348 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 OPN1SWP03999 348 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 CBLP22681 906 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 HDDC2Q7Z4H3 204 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 DPPA2Q7Z7J5 298 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 C10orf82Q8WW14 230 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 LZICQ8WZA0 190 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 NELFAQ9H3P2 528 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 ZNF442Q9H7R0 627 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 TAS2R5Q9NYW4 299 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 STX18Q9P2W9 335 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 SH3GLB1Q9Y371 365 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 FKBP7Q9Y680 259 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 NAV3Q8IVL0 2385 aa12.64□□□□□ -0.39
NIF3L1-205ENST00000409588 FXYD1O00168 92 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 RNF13O43567 381 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 NDUFS7O75251 213 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 CH25HO95992 272 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 MT-ND1P03886 318 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 ERCC1P07992 297 aaPredicted RBP12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 ASAH2BP0C7U1 165 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 CECR9P0C854 216 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 HLA-DOBP13765 273 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 KDELR2P33947 212 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 SELENOWP63302 87 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 LOXL1Q08397 574 aaPredicted RBP12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 RABL3Q5HYI8 236 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 REP15Q6BDI9 236 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 SLC35D2Q76EJ3 337 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 ZNF540Q8NDQ6 660 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 VANGL1Q8TAA9 524 aaPredicted RBP12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 LIPHQ8WWY8 451 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 FAM168AQ92567 244 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 ZNF566Q969W8 418 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 TXNDC15Q96J42 360 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 HOPXQ9BPY8 73 aaPredicted RBP12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 EMC6Q9BV81 110 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 ULBP2Q9BZM5 246 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 PLK3Q9H4B4 646 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 B3GNT2Q9NY97 397 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 GMPR2Q9P2T1 348 aaKnown RBP12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
NIF3L1-205ENST00000409588 ELOVL7A1L3X0 281 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 CD5LO43866 347 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 UBL3O95164 117 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 LYPD3O95274 346 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 THY1P04216 161 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 OR4A8P0C604 315 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 IFNGR1P15260 489 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 MDH1P40925 334 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 EVX1P49640 407 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 TAS2R41P59536 307 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 GUCY1A3Q02108 690 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 GSG1Q2KHT4 349 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 ZNF813Q6ZN06 617 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 CARM1Q86X55 608 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 RBM45Q8IUH3 476 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 OR2T12Q8NG77 320 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 OR4D11Q8NGI4 311 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 TMEM54Q969K7 222 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 FBXO17Q96EF6 278 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 ZNF837Q96EG3 531 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 TNFRSF13CQ96RJ3 184 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 RAB1BQ9H0U4 201 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 EFCAB1Q9HAE3 211 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 ZNF446Q9NWS9 450 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 MED29Q9NX70 200 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 GLTPQ9NZD2 209 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 RIMS3Q9UJD0 308 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
NIF3L1-205ENST00000409588 A0A1W2PRG6 482 aa12.61□□□□□ -0.39
NIF3L1-205ENST00000409588 FAM220BPB1ANY3 271 aa12.61□□□□□ -0.39
NIF3L1-205ENST00000409588 FARS2O95363 451 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms